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SW_8_UNK

In projects: SW_8
Displaying items 901-950 of 16401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_1312
Species: Rhodothermus marinus (62.5%)
8 12264 bp 62.39 29.83 87.38
sw_8_scaffold_1944 8 7602 bp 50.70 8.97 52.29
sw_8_scaffold_5747
Order: Halobacteriales (50%)
8 6533 bp 65.41 28.69 76.04
sw_8_scaffold_5056
Order: Halobacteriales (50%)
8 6560 bp 58.37 29.87 82.47
sw_8_scaffold_5979 8 4455 bp 56.45 9.27 78.72
sw_8_scaffold_2028
Domain: Bacteria (100%)
8 7907 bp 63.79 11.18 85.67
sw_8_scaffold_1105
Species: Salinibacter ruber (87.5%)
8 7569 bp 60.03 12.10 88.51
sw_8_scaffold_5750 8 7474 bp 61.43 11.47 75.46
sw_8_scaffold_2693 8 5584 bp 55.59 9.67 73.23
sw_8_scaffold_437 8 10535 bp 55.17 9.52 82.09
sw_8_scaffold_1543
Phylum: Bacteroidetes (50%)
8 10715 bp 63.64 53.94 89.34
sw_8_scaffold_1946 8 6383 bp 53.49 15.95 57.53
sw_8_scaffold_1520 8 8683 bp 64.62 31.45 86.10
sw_8_scaffold_3157
Species: Halorubrum coriense (50%)
8 6886 bp 53.33 13.11 76.98
sw_8_scaffold_6907
Genus: Haloarcula (50%)
8 4785 bp 57.20 29.06 81.13
sw_8_scaffold_1290 8 5532 bp 48.34 8.80 32.59
sw_8_scaffold_3030 8 6816 bp 54.74 8.92 63.38
sw_8_scaffold_4158
Domain: Bacteria (50%)
8 3408 bp 63.53 26.56 89.44
sw_8_scaffold_4837
Order: Halobacteriales (62.5%)
8 4108 bp 58.33 14.82 79.21
sw_8_scaffold_1567
Phylum: Bacteroidetes (57.14%)
7 7698 bp 66.50 51.30 89.40
sw_8_scaffold_1613 7 9492 bp 55.14 8.30 82.36
sw_8_scaffold_2812
Order: Halobacteriales (71.43%)
7 3414 bp 57.73 12.74 66.26
sw_8_scaffold_530
Phylum: Proteobacteria (57.14%)
7 9420 bp 61.13 16.35 90.70
sw_8_scaffold_3294
Phylum: Bacteroidetes (85.71%)
7 3101 bp 36.60 8.03 61.82
sw_8_scaffold_5532 7 2225 bp 41.08 13.89 86.56
sw_8_scaffold_3162
Species: Salinibacter ruber (85.71%)
7 6686 bp 58.36 14.28 55.77
sw_8_scaffold_2916
Class: Halobacteria (57.14%)
7 3754 bp 56.15 26.24 82.79
sw_8_scaffold_3034
Class: Halobacteria (57.14%)
7 3267 bp 57.21 8.48 68.23
sw_8_scaffold_2399
Class: Halobacteria (71.43%)
7 4606 bp 62.35 12.59 71.39
sw_8_scaffold_1729
Species: Salinibacter ruber (57.14%)
7 5832 bp 63.55 38.60 72.22
sw_8_scaffold_7613
Order: Halobacteriales (71.43%)
7 3043 bp 65.36 12.26 84.78
sw_8_scaffold_2037 7 6394 bp 55.02 9.67 93.88
sw_8_scaffold_3604
Class: Halobacteria (57.14%)
7 3809 bp 53.16 18.90 54.58
sw_8_scaffold_1015
Genus: Halorubrum (57.14%)
7 6336 bp 52.53 18.31 74.72
sw_8_scaffold_4172 7 2670 bp 36.82 8.31 79.89
sw_8_scaffold_923
Class: Halobacteria (71.43%)
7 8793 bp 60.66 26.84 60.08
sw_8_scaffold_2920
Species: Salinibacter ruber (85.71%)
7 6534 bp 66.19 20.37 91.00
sw_8_scaffold_2705 7 3494 bp 58.53 8.53 90.58
sw_8_scaffold_9694 7 4250 bp 58.75 6.52 69.18
sw_8_scaffold_10616 7 2525 bp 65.94 34.53 80.20
sw_8_scaffold_9925
Species: halophilic archaeon DL31 (57.14%)
7 5418 bp 65.08 14.05 89.42
sw_8_scaffold_6239
Species: Salinibacter ruber (85.71%)
7 4988 bp 66.26 12.09 84.38
sw_8_scaffold_361 7 11829 bp 55.27 9.16 76.67
sw_8_scaffold_1108 7 5994 bp 38.04 5.17 71.27
sw_8_scaffold_4398 7 6139 bp 40.71 5.44 80.49
sw_8_scaffold_3612
Class: Halobacteria (57.14%)
7 5543 bp 54.14 14.38 86.27
sw_8_scaffold_3613
Genus: Halococcus (71.43%)
7 4582 bp 60.37 15.15 66.78
sw_8_scaffold_1500 7 7139 bp 53.16 8.31 63.75
sw_8_scaffold_1385 7 6126 bp 56.82 8.62 76.74
sw_8_scaffold_2821
Domain: Archaea (85.71%)
7 5150 bp 67.13 22.06 76.41
Displaying items 901-950 of 16401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.