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SW_8_UNK

In projects: SW_8

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 17.32 Longest contig: 151.13 Kbp Bin length: 41.32 Mbp GC content: 58.51 %
Contigs count: 16401 Features count: 53796 rRNAs count: 12 tRNAs count: 452

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 16401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_24865 3 1245 bp 39.68 6.10 100.72
sw_8_scaffold_4275
Species: Halococcus salifodinae (75%)
4 2633 bp 60.46 15.31 100.72
sw_8_scaffold_18295
Domain: Bacteria (100%)
3 1001 bp 41.46 3.90 100.70
sw_8_scaffold_12616
Species: Dactylococcopsis salina (100%)
2 1296 bp 44.21 38.12 100.69
sw_8_scaffold_11151
Species: Salinibacter ruber (50%)
4 2604 bp 57.49 8.10 100.69
sw_8_scaffold_12472
Species: Natronorubrum tibetense (50%)
2 1305 bp 64.83 26.36 100.69
sw_8_scaffold_30858
Species: Natronomonas pharaonis (100%)
3 1162 bp 75.56 24.44 100.69
sw_8_scaffold_17839
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1019 bp 50.15 7.16 100.69
sw_8_scaffold_10559
Species: RBG_13_Chloroflexi_54_8_curated (50%)
2 1460 bp 50.00 7.12 100.69
sw_8_scaffold_25061
Species: Halopiger xanaduensis (50%)
2 1177 bp 64.49 10.37 100.68
sw_8_scaffold_22198
Species: Salinibacter ruber (100%)
2 1338 bp 65.99 16.07 100.67
sw_8_scaffold_7818
Species: Natronolimnobius innermongolicus (66.67%)
3 1788 bp 59.40 21.76 100.67
sw_8_scaffold_6785
Species: Natronomonas pharaonis (66.67%)
3 1952 bp 73.98 35.96 100.67
sw_8_scaffold_16946
Species: ACD2 (50%)
2 1058 bp 25.33 2.74 100.66
sw_8_scaffold_21073
Order: Haloferacales (60%)
5 1672 bp 69.98 23.39 100.66
sw_8_scaffold_16243
Order: Haloferacales (66.67%)
3 1091 bp 63.98 11.55 100.64
sw_8_scaffold_16097
Order: Halobacteriales (100%)
3 1097 bp 68.37 12.03 100.64
sw_8_scaffold_6963 4 1923 bp 53.35 11.54 100.62
sw_8_scaffold_2243 5 4219 bp 57.69 10.19 100.62
sw_8_scaffold_25051
Order: Haloferacales (66.67%)
3 1303 bp 64.85 7.75 100.61
sw_8_scaffold_6076
Species: Salinibacter ruber (50%)
2 2636 bp 66.58 9.98 100.61
sw_8_scaffold_31823
Species: Natronomonas moolapensis (100%)
2 1166 bp 70.50 17.41 100.60
sw_8_scaffold_9961
Class: Halobacteria (100%)
5 1518 bp 71.15 23.39 100.59
sw_8_scaffold_10129 3 2198 bp 55.32 8.23 100.59
sw_8_scaffold_21116
Species: Salinibacter ruber (100%)
2 1551 bp 67.63 15.93 100.58
sw_8_scaffold_17315
Species: Halococcus salifodinae (100%)
2 1041 bp 69.45 15.47 100.58
sw_8_scaffold_11095
Species: Rhodothermus marinus (66.67%)
3 1414 bp 66.41 11.03 100.57
sw_8_scaffold_10932
Species: Natronomonas pharaonis (50%)
2 1429 bp 64.87 17.35 100.56
sw_8_scaffold_9160
Species: Halothece sp. PCC 7418 (100%)
3 1608 bp 38.18 39.55 100.56
sw_8_scaffold_13204
Order: Halobacteriales (100%)
3 1256 bp 65.68 16.56 100.56
sw_8_scaffold_16512
Species: Halorubrum kocurii (50%)
2 1077 bp 69.17 9.75 100.56
sw_8_scaffold_16403
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1083 bp 38.32 3.23 100.55
sw_8_scaffold_19929
Species: Halomicrobium mukohataei (50%)
2 1450 bp 66.90 10.28 100.55
sw_8_scaffold_2336 3 3810 bp 61.89 10.00 100.55
sw_8_scaffold_16188
Species: Salinibacter ruber (50%)
2 1092 bp 63.37 6.32 100.55
sw_8_scaffold_24005
Species: Haloarcula japonica (50%)
2 1280 bp 74.30 15.08 100.55
sw_8_scaffold_4997
Order: Halobacteriales (50%)
4 2381 bp 69.93 33.77 100.55
sw_8_scaffold_5540
Species: halophilic archaeon J07HX5 (66.67%)
3 2223 bp 65.32 23.80 100.54
sw_8_scaffold_30605
Species: Natronorubrum tibetense (50%)
2 1301 bp 52.65 5.07 100.54
sw_8_scaffold_15399
Species: Natrialba magadii (100%)
2 1131 bp 53.05 14.06 100.53
sw_8_scaffold_9949
Species: GWE2_Bacteroidetes_42_39_curated (50%)
2 1519 bp 36.21 4.34 100.53
sw_8_scaffold_6078
Species: Haloquadratum sp. J07HQX50 (100%)
3 2089 bp 52.03 5.74 100.53
sw_8_scaffold_15200
Genus: Halonotius (66.67%)
3 1140 bp 62.19 7.28 100.53
sw_8_scaffold_34051
Species: Haloferax volcanii (50%)
2 1152 bp 69.88 13.11 100.52
sw_8_scaffold_21003
Class: Halobacteria (66.67%)
3 1352 bp 71.67 10.87 100.52
sw_8_scaffold_6732
Species: Salinibacter ruber (60%)
5 3409 bp 64.01 19.39 100.50
sw_8_scaffold_13469
Species: uncultured archaeon A07HR60 (50%)
4 2845 bp 66.78 40.35 100.49
sw_8_scaffold_9593 2 2036 bp 64.00 8.15 100.49
sw_8_scaffold_4226
Order: Natrialbales (75%)
4 2651 bp 68.13 23.92 100.49
sw_8_scaffold_17366
Species: Halomicrobium mukohataei (50%)
2 1039 bp 71.13 32.92 100.48
Displaying items 251-300 of 16401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.