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SW_8_UNK

In projects: SW_8

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 17.32 Longest contig: 151.13 Kbp Bin length: 41.32 Mbp GC content: 58.51 %
Contigs count: 16401 Features count: 53796 rRNAs count: 12 tRNAs count: 452

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 16401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_7270
Domain: Bacteria (66.67%)
3 1872 bp 39.74 5.34 100.48
sw_8_scaffold_13077
Genus: Natronomonas (66.67%)
3 1263 bp 69.36 53.60 100.48
sw_8_scaffold_16887 2 1060 bp 57.08 11.60 100.47
sw_8_scaffold_18133 2 1484 bp 60.78 8.29 100.47
sw_8_scaffold_12439 3 2374 bp 42.54 7.83 100.46
sw_8_scaffold_11957
Species: Haloquadratum walsbyi (100%)
2 1344 bp 52.83 15.10 100.45
sw_8_scaffold_11458
Species: halophilic archaeon J07HX64 (50%)
2 1828 bp 67.61 32.44 100.44
sw_8_scaffold_18692 3 1613 bp 50.09 8.12 100.43
sw_8_scaffold_14830
Class: Halobacteria (50%)
4 1159 bp 61.52 14.06 100.43
sw_8_scaffold_11329
Species: Natronomonas moolapensis (50%)
2 1395 bp 70.47 22.94 100.43
sw_8_scaffold_14443 3 1180 bp 56.10 7.88 100.42
sw_8_scaffold_9515
Species: uncultured archaeon A07HR67 (71.43%)
7 3806 bp 69.55 33.74 100.42
sw_8_scaffold_13865
Species: Haloferax sulfurifontis (50%)
2 1216 bp 44.41 4.61 100.41
sw_8_scaffold_15657
Species: Halosimplex carlsbadense (50%)
2 1724 bp 69.55 12.12 100.41
sw_8_scaffold_10166
Class: Halobacteria (66.67%)
3 1497 bp 68.94 15.36 100.40
sw_8_scaffold_4643
Order: Natrialbales (60%)
5 2498 bp 71.30 42.47 100.40
sw_8_scaffold_10051
Species: Natrinema gari (50%)
2 1509 bp 54.94 15.84 100.40
sw_8_scaffold_29017
Order: Halobacteriales (100%)
3 1258 bp 73.13 14.79 100.40
sw_8_scaffold_18167
Species: Natronomonas pharaonis (66.67%)
3 1007 bp 70.71 29.89 100.40
sw_8_scaffold_10023
Species: Haloquadratum walsbyi (50%)
4 1512 bp 56.94 12.57 100.40
sw_8_scaffold_18015
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1013 bp 38.40 5.73 100.40
sw_8_scaffold_32267
Species: Halobacterium sp. DL1 (100%)
2 1025 bp 66.05 8.49 100.39
sw_8_scaffold_9623
Species: Haloterrigena limicola (50%)
2 2567 bp 73.82 17.45 100.39
sw_8_scaffold_6228
Species: Natrialba magadii (66.67%)
3 2059 bp 51.00 18.65 100.39
sw_8_scaffold_9553
Species: Natronomonas moolapensis (50%)
2 1560 bp 73.21 50.90 100.38
sw_8_scaffold_17263
Species: Natronomonas moolapensis (50%)
2 1043 bp 74.02 39.02 100.38
sw_8_scaffold_31982
Species: Haloarcula sinaiiensis (50%)
2 1058 bp 70.32 31.38 100.38
sw_8_scaffold_7350
Class: Oscillatoriophycideae (66.67%)
3 1856 bp 40.68 31.30 100.38
sw_8_scaffold_12695
Species: Mesorhizobium sp. STM 4661 (50%)
2 1596 bp 64.41 13.85 100.38
sw_8_scaffold_32108
Species: Marinithermus hydrothermalis (50%)
2 1067 bp 53.51 9.00 100.37
sw_8_scaffold_12258
Order: Halobacteriales (66.67%)
3 1880 bp 53.46 7.39 100.37
sw_8_scaffold_16544
Species: Halostagnicola sp. A56 (50%)
2 1076 bp 55.58 15.71 100.37
sw_8_scaffold_11836
Class: Halobacteria (66.67%)
3 1354 bp 39.59 3.40 100.37
sw_8_scaffold_16230
Species: Halogranum salarium (50%)
2 1091 bp 67.74 16.41 100.37
sw_8_scaffold_20022
Order: Halobacteriales (66.67%)
3 1653 bp 67.39 13.67 100.36
sw_8_scaffold_11248
Species: Haloarcula vallismortis (66.67%)
3 1402 bp 66.33 8.27 100.36
sw_8_scaffold_11142
Species: Nonlabens dokdonensis (100%)
2 1411 bp 37.07 4.75 100.35
sw_8_scaffold_15366
Species: Natronolimnobius innermongolicus (50%)
2 1133 bp 56.22 12.62 100.35
sw_8_scaffold_8393
Order: Halobacteriales (66.67%)
3 1704 bp 70.66 12.03 100.35
sw_8_scaffold_30211
Species: Natronomonas pharaonis (50%)
2 1136 bp 68.66 60.56 100.35
sw_8_scaffold_15133
Domain: Bacteria (80%)
5 2888 bp 52.46 5.44 100.35
sw_8_scaffold_35218 3 1157 bp 65.17 9.16 100.35
sw_8_scaffold_12625 2 1752 bp 38.36 6.05 100.34
sw_8_scaffold_10761 4 2051 bp 43.10 5.22 100.34
sw_8_scaffold_14414
Species: Ignavibacterium album (50%)
2 1181 bp 45.39 3.98 100.34
sw_8_scaffold_14322
Species: Natronomonas pharaonis (100%)
2 1187 bp 60.91 12.64 100.34
sw_8_scaffold_15919
Order: Halobacteriales (75%)
4 1785 bp 65.49 17.03 100.34
sw_8_scaffold_5963
Species: Halorubrum hochstenium (50%)
2 2117 bp 44.36 5.10 100.33
sw_8_scaffold_10014
Order: Halobacteriales (66.67%)
3 1513 bp 65.83 23.13 100.33
sw_8_scaffold_27075
Species: Salinibacter ruber (100%)
2 1229 bp 64.52 5.70 100.33
Displaying items 301-350 of 16401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.