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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 15701-15750 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_17531
Species: Halovivax ruber (50%)
2 1813 bp 40.54 5.52 55.93
sw_10_scaffold_9476
Species: Emiliania huxleyi (50%)
2 1658 bp 52.77 6.94 55.91
sw_10_scaffold_28697 2 1315 bp 51.41 6.69 55.89
sw_10_scaffold_32346 2 1305 bp 55.48 6.21 55.86
sw_10_scaffold_34664
Species: Halorubrum aidingense (100%)
1 1058 bp 67.01 31.85 55.86
sw_10_scaffold_18566
Species: Malassezia sympodialis (100%)
1 1053 bp 58.78 5.51 55.84
sw_10_scaffold_11829 4 2128 bp 51.41 6.86 55.83
sw_10_scaffold_11661
Species: CG_Delta_04 (50%)
2 1451 bp 64.65 20.81 55.82
sw_10_scaffold_23088 2 2580 bp 51.16 5.19 55.81
sw_10_scaffold_4982 5 2490 bp 55.06 6.59 55.78
sw_10_scaffold_4734
Species: Natronomonas moolapensis (50%)
4 3840 bp 68.70 81.61 55.78
sw_10_scaffold_27288
Species: Halorubrum sp. AJ67 (50%)
2 1635 bp 58.29 11.25 55.78
sw_10_scaffold_25097
Species: Haloarcula argentinensis (50%)
2 1221 bp 71.74 36.12 55.77
sw_10_scaffold_13362
Species: Natronomonas moolapensis (50%)
4 1327 bp 65.86 37.45 55.76
sw_10_scaffold_16831 1 1130 bp 56.90 5.75 55.75
sw_10_scaffold_11350 4 1475 bp 59.86 8.20 55.73
sw_10_scaffold_11551
Species: Halococcus saccharolyticus (50%)
2 1459 bp 54.42 61.62 55.72
sw_10_scaffold_5024 2 3645 bp 52.18 5.24 55.72
sw_10_scaffold_19192
Species: Halarchaeum acidiphilum (50%)
2 1513 bp 71.18 14.14 55.72
sw_10_scaffold_19692 3 1007 bp 53.43 8.34 55.71
sw_10_scaffold_4211
Genus: Halococcus (50%)
4 2763 bp 54.54 10.93 55.70
sw_10_scaffold_24571 3 1363 bp 59.57 4.77 55.69
sw_10_scaffold_6967
Species: Planktothrix agardhii (50%)
2 2026 bp 45.85 7.50 55.68
sw_10_scaffold_15359
Species: Haladaptatus paucihalophilus (100%)
1 1207 bp 69.59 10.69 55.68
sw_10_scaffold_6256 3 3066 bp 47.62 11.48 55.68
sw_10_scaffold_3364 6 4242 bp 60.56 10.57 55.66
sw_10_scaffold_3617 4 3035 bp 49.59 5.47 55.65
sw_10_scaffold_6387
Species: Pleurocapsa minor (66.67%)
3 2135 bp 44.82 35.97 55.64
sw_10_scaffold_34388
Species: Haloterrigena turkmenica (50%)
2 1073 bp 63.00 11.37 55.64
sw_10_scaffold_4422
Order: Oscillatoriales (50%)
4 2686 bp 46.02 32.84 55.62
sw_10_scaffold_6949 4 2028 bp 56.61 8.43 55.62
sw_10_scaffold_7552
Phylum: Streptophyta (50%)
6 5606 bp 50.78 7.14 55.60
sw_10_scaffold_18363
Species: Halococcus salifodinae (50%)
4 2414 bp 65.24 31.81 55.59
sw_10_scaffold_1623 14 7949 bp 49.58 11.23 55.59
sw_10_scaffold_26275
Species: Salinibacter ruber (50%)
2 1414 bp 58.13 10.75 55.59
sw_10_scaffold_13179 1 1339 bp 53.77 7.47 55.56
sw_10_scaffold_10945 3 1512 bp 55.29 9.26 55.56
sw_10_scaffold_12656
Species: Salinibacter ruber (50%)
2 1377 bp 54.97 22.15 55.56
sw_10_scaffold_17328
Species: Prymnesium parvum (50%)
2 1107 bp 57.27 7.14 55.56
sw_10_scaffold_10818 3 1524 bp 52.76 4.99 55.51
sw_10_scaffold_8314 2 1811 bp 28.82 10.22 55.49
sw_10_scaffold_22927
Species: Haloferax gibbonsii (50%)
2 1757 bp 42.17 6.15 55.49
sw_10_scaffold_16095
Species: Halosimplex carlsbadense (100%)
1 1168 bp 66.61 7.62 55.48
sw_10_scaffold_12034 3 2418 bp 53.93 7.28 55.46
sw_10_scaffold_7774
Order: Natrialbales (50%)
4 1892 bp 59.73 31.24 55.44
sw_10_scaffold_15546 3 1975 bp 58.63 9.06 55.44
sw_10_scaffold_4915 6 2515 bp 40.24 5.01 55.43
sw_10_scaffold_16167 1 1164 bp 52.41 4.38 55.41
sw_10_scaffold_10936
Order: Halobacteriales (75%)
4 2301 bp 65.15 50.04 55.41
sw_10_scaffold_15446 3 1202 bp 37.44 6.16 55.41
Displaying items 15701-15750 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.