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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 601-650 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_3537
Species: Haloferax volcanii (50%)
2 3078 bp 50.06 6.56 100.10
sw_10_scaffold_15601 2 2071 bp 55.38 5.94 100.10
sw_10_scaffold_18881
Species: Halosimplex carlsbadense (66.67%)
3 1040 bp 69.42 17.69 100.10
sw_10_scaffold_18804
Species: Natronomonas pharaonis (50%)
2 1043 bp 69.89 18.41 100.10
sw_10_scaffold_33236
Species: Halorubrum sp. J07HR59 (100%)
2 1046 bp 67.11 8.03 100.10
sw_10_scaffold_18734
Species: RBG_13_Woesearchaeota_36_6_curated (50%)
2 1046 bp 52.49 5.35 100.10
sw_10_scaffold_39053
Species: Aphanomyces astaci (50%)
2 1049 bp 54.62 5.62 100.10
sw_10_scaffold_18604
Species: Thermomonospora curvata (50%)
2 1052 bp 68.54 9.03 100.10
sw_10_scaffold_18513
Species: Halovirus HCTV-5 (50%)
2 1055 bp 51.28 6.92 100.10
sw_10_scaffold_18460 2 1058 bp 56.52 5.48 100.10
sw_10_scaffold_15035
Species: GWA2_OP11_42_17 (50%)
2 2140 bp 45.05 7.62 100.09
sw_10_scaffold_18095
Species: Haloarcula vallismortis (50%)
2 1073 bp 68.97 4.94 100.09
sw_10_scaffold_18012
Species: Natronomonas pharaonis (50%)
2 1076 bp 75.84 97.12 100.09
sw_10_scaffold_18021
Species: Zea mays (50%)
2 1076 bp 58.36 5.86 100.09
sw_10_scaffold_17882
Species: Haloarcula sinaiiensis (100%)
2 1082 bp 59.89 7.21 100.09
sw_10_scaffold_17640
Species: Amphimedon queenslandica (50%)
2 1094 bp 57.95 6.40 100.09
sw_10_scaffold_34073 2 1115 bp 66.91 5.38 100.09
sw_10_scaffold_16974
Species: uncultured marine virus (50%)
2 1124 bp 46.35 4.80 100.09
sw_10_scaffold_16836
Species: Natronomonas moolapensis (50%)
2 1130 bp 67.88 37.17 100.09
sw_10_scaffold_30231
Species: Halorubrum lacusprofundi (50%)
2 1157 bp 65.77 27.74 100.09
sw_10_scaffold_16032
Species: halophilic archaeon J07HX64 (50%)
2 1172 bp 55.72 11.95 100.09
sw_10_scaffold_15966
Species: uncultured archaeon A07HB70 (100%)
2 1175 bp 69.19 22.64 100.09
sw_10_scaffold_15918
Species: Rhodothermus marinus (50%)
2 1178 bp 65.79 10.27 100.09
sw_10_scaffold_15861
Species: Rhodothermus marinus (50%)
2 1181 bp 64.01 4.83 100.09
sw_10_scaffold_15743
Species: Natronomonas pharaonis (50%)
2 1187 bp 66.55 106.07 100.08
sw_10_scaffold_15637
Species: Natrinema versiforme (100%)
2 1193 bp 70.33 7.63 100.08
sw_10_scaffold_15639
Species: Haloarcula japonica (50%)
2 1193 bp 60.18 10.06 100.08
sw_10_scaffold_15514
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 1199 bp 46.62 4.42 100.08
sw_10_scaffold_15523
Species: Calditerrivibrio nitroreducens (50%)
2 1199 bp 45.20 8.67 100.08
sw_10_scaffold_15450
Species: Natronomonas moolapensis (50%)
2 1202 bp 67.05 11.56 100.08
sw_10_scaffold_15454
Species: Halorubrum lipolyticum (50%)
2 1202 bp 75.71 87.35 100.08
sw_10_scaffold_19671
Species: CG_Arma_02 (50%)
2 2443 bp 51.70 5.69 100.08
sw_10_scaffold_6198
Order: Halobacteriales (66.67%)
3 3672 bp 66.34 61.79 100.08
sw_10_scaffold_5069
Species: Natronomonas moolapensis (50%)
2 2461 bp 69.52 26.09 100.08
sw_10_scaffold_14777
Species: Natronomonas moolapensis (50%)
2 1241 bp 72.36 112.57 100.08
sw_10_scaffold_14781
Species: Haloarcula argentinensis (50%)
2 1241 bp 73.01 12.33 100.08
sw_10_scaffold_14710
Species: Haloarcula japonica (50%)
2 1244 bp 67.93 12.94 100.08
sw_10_scaffold_14728
Species: Halosimplex carlsbadense (100%)
2 1244 bp 70.82 20.90 100.08
sw_10_scaffold_14462
Species: Haloquadratum walsbyi (50%)
2 1259 bp 43.69 4.53 100.08
sw_10_scaffold_13905
Species: Acidithiobacillus ferrivorans (50%)
2 1292 bp 56.97 7.35 100.08
sw_10_scaffold_13712
Species: halophilic archaeon DL31 (50%)
2 1304 bp 68.33 11.20 100.08
sw_10_scaffold_30655
Species: Halorubrum hochstenium (100%)
2 1307 bp 59.53 7.80 100.08
sw_10_scaffold_13523
Species: Frankia sp. EAN1pec (50%)
2 1316 bp 71.50 7.29 100.08
sw_10_scaffold_13308
Species: Halovirus HVTV-1 (50%)
2 1331 bp 51.39 8.56 100.08
sw_10_scaffold_13084
Species: Haloquadratum walsbyi (50%)
2 1346 bp 44.50 9.58 100.07
sw_10_scaffold_12949
Species: Haloarcula vallismortis (50%)
2 1355 bp 56.53 31.96 100.07
sw_10_scaffold_7650
Species: Acaryochloris marina (50%)
2 2728 bp 44.61 5.72 100.07
sw_10_scaffold_12443
Species: Pyrococcus sp. NA2 (50%)
2 1391 bp 40.76 5.90 100.07
sw_10_scaffold_12178
Species: Fluviicola taffensis (50%)
2 1412 bp 35.13 5.45 100.07
sw_10_scaffold_4010 3 2854 bp 45.44 11.88 100.07
Displaying items 601-650 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.