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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 551-600 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_14031
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1285 bp 55.80 7.39 100.16
sw_10_scaffold_13973
Species: Halosimplex carlsbadense (50%)
2 1288 bp 72.59 10.87 100.16
sw_10_scaffold_7486
Species: Natronomonas pharaonis (50%)
2 1935 bp 75.81 38.45 100.16
sw_10_scaffold_13924
Species: Tolypothrix bouteillei (50%)
2 1291 bp 56.86 5.50 100.16
sw_10_scaffold_13820
Species: Natrinema gari (50%)
2 1297 bp 78.87 38.09 100.15
sw_10_scaffold_5392
Order: Fabales (50%)
4 3259 bp 56.40 6.26 100.15
sw_10_scaffold_13631
Species: marine sediment metagenome (100%)
2 1309 bp 40.79 6.88 100.15
sw_10_scaffold_13493
Species: Natronomonas pharaonis (50%)
2 1318 bp 60.77 12.14 100.15
sw_10_scaffold_13831 2 2004 bp 57.34 6.84 100.15
sw_10_scaffold_13046
Species: Haloferax mediterranei (50%)
2 1348 bp 48.89 6.82 100.15
sw_10_scaffold_12934
Species: Halogeometricum borinquense (50%)
2 1357 bp 77.75 25.50 100.15
sw_10_scaffold_6841
Species: Natronomonas pharaonis (50%)
2 2046 bp 66.57 48.92 100.15
sw_10_scaffold_12713
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1372 bp 59.84 10.35 100.15
sw_10_scaffold_6765
Species: Halococcus saccharolyticus (50%)
2 2061 bp 67.73 13.39 100.15
sw_10_scaffold_12638
Species: Haloterrigena limicola (50%)
2 1378 bp 67.20 10.96 100.15
sw_10_scaffold_12542
Species: Halogranum salarium (50%)
2 1384 bp 75.07 36.05 100.15
sw_10_scaffold_29605
Species: Halopiger xanaduensis (50%)
2 1387 bp 56.60 7.21 100.14
sw_10_scaffold_19888
Species: halophilic archaeon J07HX64 (50%)
2 1393 bp 71.28 30.44 100.14
sw_10_scaffold_23975
Species: Salinibacter ruber (50%)
2 1396 bp 68.70 8.45 100.14
sw_10_scaffold_12197 2 1411 bp 64.64 30.97 100.14
sw_10_scaffold_25171
Species: Natronomonas pharaonis (100%)
2 1423 bp 64.30 25.37 100.14
sw_10_scaffold_11717
Species: Natronomonas pharaonis (50%)
2 1447 bp 70.63 11.33 100.14
sw_10_scaffold_11634
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1453 bp 67.10 14.18 100.14
sw_10_scaffold_11156
Species: Halostagnicola sp. A56 (100%)
2 1492 bp 73.53 38.87 100.13
sw_10_scaffold_5751
Species: Natronomonas moolapensis (50%)
2 2274 bp 69.17 43.36 100.13
sw_10_scaffold_10913
Species: Alkaliphilus metalliredigens (100%)
2 1516 bp 47.03 20.45 100.13
sw_10_scaffold_19574
Species: Halococcus salifodinae (50%)
2 1543 bp 65.07 22.81 100.13
sw_10_scaffold_10531
Species: Fusobacterium periodonticum (50%)
2 1552 bp 44.20 4.77 100.13
sw_10_scaffold_9996
Species: Halococcus saccharolyticus (50%)
2 1603 bp 71.55 39.49 100.13
sw_10_scaffold_9960
Species: Natronomonas pharaonis (100%)
2 1606 bp 73.91 43.03 100.13
sw_10_scaffold_14192
Species: Natronomonas pharaonis (100%)
2 1621 bp 72.42 18.51 100.12
sw_10_scaffold_9783
Species: Halorubrum saccharovorum (50%)
2 1627 bp 71.42 11.92 100.12
sw_10_scaffold_15867
Species: Natronomonas pharaonis (100%)
2 1666 bp 69.69 17.53 100.12
sw_10_scaffold_9382
Species: Natronomonas pharaonis (50%)
2 1669 bp 69.62 33.79 100.12
sw_10_scaffold_9347
Species: Amycolatopsis methanolica (50%)
2 1672 bp 60.35 6.52 100.12
sw_10_scaffold_9326 2 1675 bp 48.84 5.79 100.12
sw_10_scaffold_15007
Species: Halococcus hamelinensis (50%)
2 1675 bp 72.00 20.90 100.12
sw_10_scaffold_9239
Species: Halovivax ruber (100%)
2 1684 bp 66.39 12.59 100.12
sw_10_scaffold_9241
Species: Halogranum salarium (50%)
2 1684 bp 70.90 32.48 100.12
sw_10_scaffold_8601
Species: Haloferax sp. Arc-Hr (50%)
2 1771 bp 65.73 13.78 100.11
sw_10_scaffold_6427
Species: Natronomonas moolapensis (100%)
2 3578 bp 68.08 84.99 100.11
sw_10_scaffold_6938
Genus: Natronomonas (80%)
5 4636 bp 67.60 84.34 100.11
sw_10_scaffold_7680
Species: Anoplophora glabripennis (50%)
2 1906 bp 48.06 6.61 100.11
sw_10_scaffold_4879
Species: Halorubrum saccharovorum (50%)
2 3833 bp 67.96 13.51 100.10
sw_10_scaffold_7433
Class: Halobacteria (66.67%)
3 1942 bp 68.90 10.71 100.10
sw_10_scaffold_6058
Species: Natronomonas pharaonis (83.33%)
6 2925 bp 70.05 71.72 100.10
sw_10_scaffold_31550
Species: Natronomonas moolapensis (100%)
2 1001 bp 64.14 28.07 100.10
sw_10_scaffold_19851
Species: Halorubrum coriense (50%)
2 1001 bp 69.23 11.79 100.10
sw_10_scaffold_19606
Species: Halomicrobium mukohataei (50%)
2 1010 bp 72.38 12.18 100.10
sw_10_scaffold_19535
Species: RBG_19FT_COMBO_Armatimonadetes_69_19_curated (50%)
2 1013 bp 61.30 5.73 100.10
Displaying items 551-600 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.