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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 16601-16650 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_16799
Species: GWE2_Bacteroidetes_29_8_curated (50%)
2 1132 bp 37.37 4.86 93.55
sw_10_scaffold_19164 2 1029 bp 54.03 4.86 64.43
sw_10_scaffold_19650 2 1008 bp 58.04 4.86 97.92
sw_10_scaffold_4326
Species: BJP_IG2069_Ignavibacteriae_38_11 (100%)
1 2718 bp 39.77 4.86 53.31
sw_10_scaffold_17160 2 1629 bp 48.68 4.85 69.80
sw_10_scaffold_17678 1 1094 bp 55.85 4.85 23.03
sw_10_scaffold_11214
Species: endosymbiont of Riftia pachyptila (100%)
1 1486 bp 53.70 4.85 99.93
sw_10_scaffold_26552
Species: Desulfohalobium retbaense (50%)
2 1567 bp 36.44 4.85 31.78
sw_10_scaffold_11486
Species: Coffea canephora (50%)
2 1464 bp 52.94 4.85 59.02
sw_10_scaffold_18611
Species: Pedosphaera parvula (50%)
2 1052 bp 50.29 4.85 99.52
sw_10_scaffold_7216 2 1981 bp 40.13 4.85 78.75
sw_10_scaffold_7460
Domain: Archaea (50%)
4 2868 bp 33.40 4.85 89.23
sw_10_scaffold_19118 1 1031 bp 56.35 4.85 99.81
sw_10_scaffold_13605 3 2021 bp 49.43 4.85 81.05
sw_10_scaffold_10162 2 1587 bp 36.42 4.85 99.05
sw_10_scaffold_8704
Species: RHI_OP11_45_10 (50%)
2 1754 bp 46.81 4.85 88.94
sw_10_scaffold_13447 2 2411 bp 53.88 4.85 84.36
sw_10_scaffold_9736
Class: Halobacteria (100%)
3 2190 bp 45.11 4.84 86.44
sw_10_scaffold_10326
Species: marine sediment metagenome (66.67%)
3 1571 bp 31.25 4.84 94.72
sw_10_scaffold_19090 1 1032 bp 27.23 4.84 72.09
sw_10_scaffold_14484
Domain: Archaea (66.67%)
3 1982 bp 42.03 4.84 99.29
sw_10_scaffold_19573
Species: GWA2_OD1_56_11 (50%)
2 1012 bp 40.42 4.84 99.01
sw_10_scaffold_17985 5 2314 bp 51.38 4.84 74.94
sw_10_scaffold_14115
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 1280 bp 34.30 4.84 96.56
sw_10_scaffold_17613
Species: marine sediment metagenome (100%)
1 1095 bp 33.42 4.84 85.75
sw_10_scaffold_18978
Species: GWC2_OD1_41_17 (100%)
1 1036 bp 50.97 4.83 99.90
sw_10_scaffold_14392
Species: GWF2_OD1_43_32 (50%)
2 1264 bp 34.73 4.83 88.53
sw_10_scaffold_16259
Species: Sulfolobus solfataricus (50%)
2 1160 bp 40.17 4.83 67.76
sw_10_scaffold_19001 3 1036 bp 29.73 4.83 91.80
sw_10_scaffold_14408 4 1263 bp 34.20 4.83 93.82
sw_10_scaffold_12798 3 1367 bp 37.09 4.83 43.89
sw_10_scaffold_23115 2 1367 bp 38.48 4.83 90.64
sw_10_scaffold_17690 3 1986 bp 55.79 4.83 46.83
sw_10_scaffold_15861
Species: Rhodothermus marinus (50%)
2 1181 bp 64.01 4.83 100.09
sw_10_scaffold_36603
Species: Mallada signata (100%)
1 1139 bp 54.61 4.83 99.82
sw_10_scaffold_28161
Species: Genlisea aurea (100%)
2 1448 bp 54.14 4.83 98.41
sw_10_scaffold_17374 3 2050 bp 51.56 4.83 69.07
sw_10_scaffold_17109
Species: R_OD1_Yanofskybacteria_43_32 (100%)
1 1118 bp 50.36 4.83 99.82
sw_10_scaffold_6482
Genus: Halococcus (66.67%)
3 2116 bp 44.14 4.82 101.09
sw_10_scaffold_10071 1 1596 bp 46.55 4.82 78.01
sw_10_scaffold_25519 4 1389 bp 33.98 4.82 88.55
sw_10_scaffold_17969
Species: GWA2_Elusimicrobia_69_24_curated (50%)
2 1079 bp 54.68 4.82 94.81
sw_10_scaffold_13345 2 2179 bp 36.53 4.82 22.17
sw_10_scaffold_12201 1 1410 bp 21.35 4.82 91.28
sw_10_scaffold_13366
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 2654 bp 36.70 4.82 32.10
sw_10_scaffold_17037 2 1121 bp 55.84 4.82 97.15
sw_10_scaffold_8637 3 1765 bp 56.60 4.82 83.63
sw_10_scaffold_12468 1 1389 bp 58.60 4.82 70.63
sw_10_scaffold_16176
Species: Populus trichocarpa (50%)
2 1824 bp 53.29 4.82 81.58
sw_10_scaffold_16234 2 1161 bp 45.13 4.82 69.25
Displaying items 16601-16650 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.