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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 251-300 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_9747
Species: Haloarcula vallismortis (50%)
2 1630 bp 69.02 37.61 100.86
sw_10_scaffold_12365 3 1398 bp 49.21 8.08 100.86
sw_10_scaffold_8659
Species: Haloquadratum walsbyi (100%)
2 1761 bp 57.01 7.38 100.85
sw_10_scaffold_15748
Species: Natronomonas moolapensis (50%)
2 1187 bp 73.63 35.55 100.84
sw_10_scaffold_16158 2 1586 bp 26.73 5.30 100.82
sw_10_scaffold_20266
Species: R_RIF_OD1_02_44_13 (50%)
2 1497 bp 51.90 11.36 100.80
sw_10_scaffold_17656 3 1500 bp 56.93 8.27 100.80
sw_10_scaffold_19710
Species: Natrinema versiforme (50%)
2 1006 bp 55.57 20.78 100.79
sw_10_scaffold_15886
Class: Halobacteria (66.67%)
3 2265 bp 68.83 20.53 100.79
sw_10_scaffold_30495
Species: Halococcus salifodinae (66.67%)
3 1393 bp 69.13 18.31 100.79
sw_10_scaffold_8341
Genus: Natronomonas (66.67%)
3 1807 bp 74.99 103.71 100.77
sw_10_scaffold_19071
Species: Ponticoccus sp. UMTAT08 (100%)
2 1033 bp 64.28 10.36 100.77
sw_10_scaffold_13911
Species: Borrelia hermsii (50%)
2 1292 bp 41.72 6.66 100.77
sw_10_scaffold_24420
Species: Halococcus saccharolyticus (100%)
2 1295 bp 66.33 8.49 100.77
sw_10_scaffold_13439
Order: Haloferacales (50%)
4 1322 bp 68.38 17.55 100.76
sw_10_scaffold_7040 5 2010 bp 67.41 10.85 100.75
sw_10_scaffold_13754
Species: Salinibacter ruber (100%)
2 1745 bp 63.67 54.96 100.74
sw_10_scaffold_21230 2 1480 bp 54.93 4.46 100.74
sw_10_scaffold_17990
Species: Archaeoglobus profundus (50%)
2 1078 bp 49.07 4.64 100.74
sw_10_scaffold_13592
Species: Natronococcus amylolyticus (100%)
2 2165 bp 66.47 43.97 100.74
sw_10_scaffold_12072
Class: Halobacteria (50%)
4 1909 bp 65.22 24.88 100.73
sw_10_scaffold_10912
Species: Halococcus hamelinensis (50%)
2 1516 bp 65.24 11.08 100.73
sw_10_scaffold_12755 4 2234 bp 35.23 5.37 100.72
sw_10_scaffold_14409
Species: CG_Alphaprot_01 (50%)
2 1263 bp 54.95 4.99 100.71
sw_10_scaffold_23225
Species: Haliangium ochraceum (50%)
2 1406 bp 71.98 7.61 100.71
sw_10_scaffold_16934
Species: Natronomonas moolapensis (50%)
4 1126 bp 67.58 29.93 100.71
sw_10_scaffold_14246
Species: Bacillus sp. 2521 (50%)
2 1272 bp 43.00 5.27 100.71
sw_10_scaffold_3162
Phylum: Bacteroidetes (66.67%)
3 3277 bp 62.53 8.09 100.70
sw_10_scaffold_10303 3 1573 bp 51.24 5.59 100.70
sw_10_scaffold_11933
Genus: Halorubrum (66.67%)
3 1430 bp 71.89 27.06 100.70
sw_10_scaffold_19870 2 1001 bp 50.15 5.69 100.70
sw_10_scaffold_13951
Species: Halorubrum saccharovorum (50%)
4 1290 bp 64.57 14.03 100.70
sw_10_scaffold_11730
Species: Haloterrigena limicola (50%)
2 1445 bp 52.11 7.40 100.69
sw_10_scaffold_13286
Species: Branchiostoma floridae (50%)
2 2467 bp 55.82 5.76 100.69
sw_10_scaffold_11624
Species: Candidatus Nanosalina sp. J07AB43 (100%)
2 1454 bp 52.20 5.57 100.69
sw_10_scaffold_8698
Species: Natronomonas moolapensis (66.67%)
3 1755 bp 74.93 97.95 100.68
sw_10_scaffold_19175
Species: uncultured archaeon A07HB70 (50%)
2 1028 bp 71.69 29.67 100.68
sw_10_scaffold_11420
Species: Salinibacter ruber (50%)
2 1469 bp 68.82 66.24 100.68
sw_10_scaffold_2961
Species: Natronomonas moolapensis (80%)
5 3388 bp 75.53 49.82 100.68
sw_10_scaffold_15870
Species: Halogeometricum borinquense (50%)
2 1180 bp 74.41 64.24 100.68
sw_10_scaffold_15537 4 1198 bp 42.49 4.34 100.67
sw_10_scaffold_18591 3 1052 bp 63.78 14.45 100.67
sw_10_scaffold_18375
Species: Haloarcula japonica (50%)
2 1061 bp 66.54 33.27 100.66
sw_10_scaffold_15152
Species: halophilic archaeon J07HB67 (50%)
2 1219 bp 68.66 57.42 100.66
sw_10_scaffold_16341
Species: RBG_13_Aminicenantes_59_9_curated (66.67%)
3 2328 bp 66.92 10.70 100.64
sw_10_scaffold_17250
Species: Halomicrobium mukohataei (50%)
2 1720 bp 75.00 40.00 100.64
sw_10_scaffold_14441
Species: Halogeometricum borinquense (50%)
2 1261 bp 73.43 53.69 100.63
sw_10_scaffold_5945 2 2233 bp 46.98 5.46 100.63
sw_10_scaffold_10013
Order: Halobacteriales (66.67%)
3 1601 bp 68.58 17.80 100.63
sw_10_scaffold_695
Domain: Bacteria (53.85%)
13 9786 bp 49.06 8.93 100.61
Displaying items 251-300 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.