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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 301-350 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_19842
Species: Halogranum salarium (50%)
2 1002 bp 68.16 20.36 100.60
sw_10_scaffold_16036
Species: Nocardiopsis alba (100%)
2 1172 bp 66.47 6.40 100.60
sw_10_scaffold_19662
Species: Natronomonas pharaonis (50%)
2 1008 bp 68.35 31.85 100.59
sw_10_scaffold_19517
Species: Halostagnicola sp. A56 (50%)
2 1014 bp 38.86 3.94 100.59
sw_10_scaffold_15796
Order: Haloferacales (50%)
4 1184 bp 71.45 23.56 100.59
sw_10_scaffold_3926 3 2893 bp 46.87 11.37 100.59
sw_10_scaffold_15463
Species: Halosimplex carlsbadense (100%)
2 1202 bp 71.21 11.31 100.58
sw_10_scaffold_23215
Species: Natronomonas pharaonis (66.67%)
3 1551 bp 68.79 79.63 100.58
sw_10_scaffold_7695 3 1903 bp 60.85 5.99 100.58
sw_10_scaffold_18652
Species: Natronomonas pharaonis (100%)
2 1050 bp 72.67 17.05 100.57
sw_10_scaffold_18579
Species: uncultured bacterium (50%)
2 1053 bp 49.10 3.80 100.57
sw_10_scaffold_14867 4 1235 bp 43.81 4.53 100.57
sw_10_scaffold_4546 5 2649 bp 68.67 20.42 100.57
sw_10_scaffold_10135
Species: Natronomonas moolapensis (50%)
6 2300 bp 69.48 117.39 100.57
sw_10_scaffold_13887
Species: Halosimplex carlsbadense (66.67%)
6 2661 bp 67.98 24.73 100.56
sw_10_scaffold_7193
Species: Halovivax ruber (50%)
2 1984 bp 72.43 24.90 100.55
sw_10_scaffold_17152
Species: Natronomonas pharaonis (100%)
2 1116 bp 68.82 111.20 100.54
sw_10_scaffold_13730
Species: Haloarcula sp. D1 (100%)
2 1304 bp 75.38 20.63 100.54
sw_10_scaffold_17078 3 1119 bp 47.10 6.34 100.54
sw_10_scaffold_5863
Species: uncultured bacterium (50%)
2 2253 bp 40.92 5.28 100.53
sw_10_scaffold_18123
Species: Natronomonas pharaonis (66.67%)
3 1719 bp 68.76 17.57 100.52
sw_10_scaffold_13065
Species: Janthinobacterium lividum (50%)
2 1346 bp 53.19 6.24 100.52
sw_10_scaffold_13070
Species: Natronomonas moolapensis (50%)
2 1346 bp 70.28 15.30 100.52
sw_10_scaffold_16182
Species: halophilic archaeon J07HX5 (50%)
2 1164 bp 39.69 8.25 100.52
sw_10_scaffold_19005
Species: Halococcus saccharolyticus (50%)
4 1970 bp 61.22 10.41 100.51
sw_10_scaffold_19537 2 2376 bp 62.37 16.80 100.51
sw_10_scaffold_12329
Species: Halogranum salarium (50%)
2 1400 bp 72.43 33.21 100.50
sw_10_scaffold_19884
Species: Enterococcus pallens (50%)
2 1000 bp 54.50 5.70 100.50
sw_10_scaffold_19002
Species: Haloarcula marismortui (50%)
2 1036 bp 58.49 33.30 100.48
sw_10_scaffold_18833
Species: Natronomonas pharaonis (50%)
2 1042 bp 73.03 30.90 100.48
sw_10_scaffold_4878
Species: Natronomonas moolapensis (100%)
3 2526 bp 67.50 123.20 100.48
sw_10_scaffold_13947
Species: Natronomonas moolapensis (100%)
3 1290 bp 68.29 22.79 100.47
sw_10_scaffold_4116
Species: Halococcus hamelinensis (50%)
2 2801 bp 66.12 11.07 100.46
sw_10_scaffold_17981
Class: Halobacteria (66.67%)
3 1078 bp 38.40 3.90 100.46
sw_10_scaffold_10858
Species: Xanthomonas axonopodis (50%)
2 1520 bp 35.46 4.93 100.46
sw_10_scaffold_9666
Genus: Haloarcula (66.67%)
3 2192 bp 65.74 9.85 100.46
sw_10_scaffold_17602
Species: Natronolimnobius innermongolicus (50%)
2 1096 bp 61.77 17.24 100.46
sw_10_scaffold_10672 4 1537 bp 43.40 6.38 100.46
sw_10_scaffold_16025
Species: Natrialba chahannaoensis (50%)
2 1541 bp 69.82 35.50 100.45
sw_10_scaffold_10512
Species: Natronomonas moolapensis (100%)
2 1553 bp 68.58 52.61 100.45
sw_10_scaffold_22784 4 1568 bp 44.71 7.14 100.45
sw_10_scaffold_8671
Class: Halobacteria (60%)
5 2715 bp 57.05 8.47 100.44
sw_10_scaffold_3279
Order: Halobacteriales (50%)
4 3211 bp 74.49 25.44 100.44
sw_10_scaffold_12571
Species: Natronomonas pharaonis (50%)
2 1383 bp 72.09 110.20 100.43
sw_10_scaffold_4803
Species: Rhizobium leguminosarum (50%)
2 2554 bp 54.35 13.39 100.43
sw_10_scaffold_13176 3 2106 bp 58.21 4.42 100.43
sw_10_scaffold_8373
Species: Halovirus HGTV-1 (75%)
4 2587 bp 55.55 9.32 100.43
sw_10_scaffold_11914
Species: Natrialba magadii (100%)
2 1431 bp 54.44 11.67 100.42
sw_10_scaffold_24742
Species: Halobacterium salinarum (50%)
2 1440 bp 51.46 6.46 100.42
sw_10_scaffold_7570
Genus: Natronorubrum (50%)
4 1921 bp 53.36 9.27 100.42
Displaying items 301-350 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.