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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 351-400 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_15483
Species: Halococcus thailandensis (50%)
2 1201 bp 40.55 4.75 100.42
sw_10_scaffold_5913
Order: Halobacteriales (50%)
4 2241 bp 60.73 56.00 100.40
sw_10_scaffold_15048
Domain: Bacteria (50%)
4 1751 bp 46.89 8.79 100.40
sw_10_scaffold_14530
Class: Nanohaloarchaea (66.67%)
3 1255 bp 41.12 8.76 100.40
sw_10_scaffold_10189
Species: Natronomonas pharaonis (66.67%)
3 2510 bp 71.00 37.29 100.40
sw_10_scaffold_28315
Species: Candidatus Nanosalina sp. J07AB43 (50%)
4 1509 bp 47.05 5.10 100.40
sw_10_scaffold_14386
Species: Halovivax asiaticus (50%)
2 1264 bp 61.16 19.94 100.40
sw_10_scaffold_8595
Species: Halococcus salifodinae (50%)
2 1772 bp 70.15 32.84 100.40
sw_10_scaffold_10844
Species: Halococcus salifodinae (66.67%)
3 1521 bp 70.22 35.50 100.39
sw_10_scaffold_10718
Species: Zea mays (50%)
2 1533 bp 54.08 5.61 100.39
sw_10_scaffold_18876
Species: Halomicrobium mukohataei (50%)
2 1040 bp 67.69 38.56 100.38
sw_10_scaffold_13636
Species: Halostagnicola larsenii (66.67%)
3 1309 bp 69.21 13.14 100.38
sw_10_scaffold_14886
Species: Halococcus salifodinae (100%)
4 2672 bp 68.64 27.77 100.37
sw_10_scaffold_24572
Species: Rhodothermus marinus (50%)
2 1342 bp 71.24 7.23 100.37
sw_10_scaffold_13136 3 1342 bp 48.73 6.41 100.37
sw_10_scaffold_13139
Species: RBG_16_Bathyarchaeota_57_9_curated (50%)
2 1342 bp 51.27 5.22 100.37
sw_10_scaffold_18031
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1076 bp 67.10 22.03 100.37
sw_10_scaffold_15340
Species: Halostagnicola larsenii (66.67%)
3 1617 bp 69.64 7.79 100.37
sw_10_scaffold_17966
Species: Natrialba magadii (100%)
2 1079 bp 55.33 18.81 100.37
sw_10_scaffold_17892 2 1082 bp 63.31 22.18 100.37
sw_10_scaffold_28120
Class: Halobacteria (100%)
3 1097 bp 71.29 45.21 100.37
sw_10_scaffold_9563 2 1650 bp 41.52 5.58 100.36
sw_10_scaffold_12297
Species: Natrialba magadii (100%)
2 1937 bp 57.10 33.30 100.36
sw_10_scaffold_9250
Species: Halosimplex carlsbadense (50%)
2 1683 bp 55.26 5.76 100.36
sw_10_scaffold_2997
Species: Natronomonas moolapensis (66.67%)
3 3369 bp 69.43 37.58 100.36
sw_10_scaffold_16967
Species: Natronomonas pharaonis (50%)
2 1124 bp 66.01 28.56 100.36
sw_10_scaffold_29725
Species: uncultured archaeon A07HR67 (50%)
2 1124 bp 70.82 35.52 100.36
sw_10_scaffold_11541 3 1976 bp 50.35 6.12 100.35
sw_10_scaffold_16425
Species: Natronomonas pharaonis (100%)
2 1151 bp 72.63 32.15 100.35
sw_10_scaffold_16301
Species: Streptomyces sp. WM6386 (50%)
2 1157 bp 73.98 9.08 100.35
sw_10_scaffold_1125 7 8416 bp 45.16 58.02 100.35
sw_10_scaffold_11553 3 1459 bp 41.47 5.35 100.34
sw_10_scaffold_11554 5 1459 bp 46.88 4.87 100.34
sw_10_scaffold_15736
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (50%)
2 1187 bp 47.77 7.83 100.34
sw_10_scaffold_24166
Species: Halobacterium sp. DL1 (66.67%)
3 1486 bp 73.55 11.84 100.34
sw_10_scaffold_4448
Species: Natronorubrum bangense (50%)
4 2676 bp 71.00 33.33 100.34
sw_10_scaffold_8433
Species: Natronomonas pharaonis (66.67%)
3 1794 bp 73.36 20.68 100.33
sw_10_scaffold_15462
Species: Halomicrobium mukohataei (50%)
2 1202 bp 61.15 5.91 100.33
sw_10_scaffold_15391
Species: Halococcus salifodinae (100%)
2 1205 bp 69.38 18.92 100.33
sw_10_scaffold_15140
Species: Halococcus salifodinae (100%)
2 1220 bp 70.98 23.28 100.33
sw_10_scaffold_5910
Species: Natronomonas pharaonis (50%)
4 2748 bp 73.07 125.22 100.33
sw_10_scaffold_27141
Species: Natrinema altunense (66.67%)
3 1528 bp 56.35 7.66 100.33
sw_10_scaffold_6282
Class: Halobacteria (66.67%)
3 2156 bp 63.40 10.44 100.33
sw_10_scaffold_7089
Genus: Natronomonas (60%)
5 3086 bp 72.13 50.36 100.32
sw_10_scaffold_14783
Species: Natronomonas moolapensis (100%)
2 1241 bp 68.57 23.29 100.32
sw_10_scaffold_14461
Species: Halorubrum lacusprofundi (50%)
2 1259 bp 73.55 37.09 100.32
sw_10_scaffold_16020
Order: Natrialbales (60%)
5 2204 bp 69.51 18.92 100.32
sw_10_scaffold_14373
Species: Halovirus HVTV-1 (50%)
2 1265 bp 48.62 6.96 100.32
sw_10_scaffold_14304
Order: Haloferacales (66.67%)
3 1268 bp 69.72 24.53 100.32
sw_10_scaffold_9933
Species: Micromonospora sp. M42 (50%)
2 1609 bp 70.42 8.39 100.31
Displaying items 351-400 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.