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sw_11_scaffold_773

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_773_1
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

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52..897
DNA (846bp) protein (282aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LIH1_9CYAN
HipA-like protein
HipA-like protein {ECO:0000313|EMBL:AFZ23917.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
sw_11_scaffold_773_2
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1175..1978
DNA (804bp) protein (268aa)
HIRAN domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LHZ9_9CYAN
HIRAN domain family {ECO:0000313|EMBL:EDX87153.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
HIRAN domain-containing protein
sw_11_scaffold_773_3
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2072..2275)
DNA (204bp) protein (68aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase {ECO:0000313|EMBL:AFZ32456.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AFZ32456.1};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" so
NADPH:quinone reductase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XK61_9CHRO
sw_11_scaffold_773_4
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2269..2481)
DNA (213bp) protein (71aa)
Putative adh_zinc, zinc-binding dehydrogenase n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FTP4_SHESH
adh_zinc, zinc-binding dehydrogenase
Putative adh_zinc, zinc-binding dehydrogenase {ECO:0000313|EMBL:ABV36217.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source=
sw_11_scaffold_773_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2545..2745)
DNA (201bp) protein (67aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HZ37_CYAP4
Alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACL47685.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece s
sw_11_scaffold_773_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2691..3047)
DNA (357bp) protein (119aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EIL90740.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
signal transduction histidine kinase LytS
sw_11_scaffold_773_7
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3076..4095)
DNA (1020bp) protein (340aa)
Transposase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VN59_9CYAN
Transposase {ECO:0000313|EMBL:ESA34119.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
IS4 family transposase
sw_11_scaffold_773_8
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4198..4314)
DNA (117bp) protein (39aa)
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:ERG42810.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromona
sw_11_scaffold_773_9
unknown

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4424..4612
DNA (189bp) protein (63aa)

This feature has no annotations

sw_11_scaffold_773_10

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comp(5040..6848)
DNA (1809bp) protein (603aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN34486.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
penicillin-binding protein id=24414033 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
sw_11_scaffold_773_11
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6938..7972)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031B6C12
Alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACL47685.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece s
sw_11_scaffold_773_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(8041..9003)
DNA (963bp) protein (321aa)
Abortive infection protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7L2_9CHLR
Abortive infection protein {ECO:0000313|EMBL:EFH79873.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
type 11 methyltransferase
sw_11_scaffold_773_13
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9008..9547)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
Putative uncharacterized protein id=2557314 bin=GWC1_Spirochaetes_27_15 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
sw_11_scaffold_773_14

Not on your lists

comp(9699..10307)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI00036594CC
Uncharacterized protein {ECO:0000313|EMBL:KKK87977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulator
sw_11_scaffold_773_trna_2
unknown

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comp(10449..10521)
DNA (73bp)
transferRNA
sw_11_scaffold_773_trna_1
unknown

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comp(10955..11029)
DNA (75bp)
transferRNA
sw_11_scaffold_773_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11060..11149)
DNA (90bp) protein (30aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH22945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 17 items

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