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sw_11_scaffold_6_40

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(33746..34300)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=795797 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 226
  • Evalue 2.80e-56
2'-5' RNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J591_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 226
  • Evalue 2.00e-56
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 226
  • Evalue 5.70e-57

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Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 555
ATGCGACTGTTCGTCAGTGTCGATCTCCCCGACGGGATGAGCGGGGCCGTCGAGACCGTACAGGAGCGACTCCGGCCCGCCTCCGGACTGCGGTTCGTCGACCCCGAGCAGGCACACGTCACGGTGACGTTCGTCGGCGACGTCGCAGAGGGGAAACGGGAGACGATCGACGGCGCAGTCGAGCGCGGCGTCCGGCGCGCCGGTGTCGAGCCGTTCGAGGTGACCTATGGCGGACTGGGGGTGTTCCCCTCGCTCGAGTACATTTCCGTGGTGTGGCTCGGCGTCGAGCGCGGCGGCGACGAACTCGGGCGGCTCCACGAGGCCGTCGAGACCGAGACGGCGGGCGTCGGCGTCGACCCGGAGAGCCACGAGTTTACCCCACACGTCACGCTGGCCCGGATGGACCACGCGGAGGGGAAGAACCACGTACGGCAGGTCGTCGCGGAGCACGCCCCGACCGTGGGCACGACGACCGTCGGGGCGGTGCGGCTGAAACGGAGCGACCTGGGACCCGACGGACCGGCGTACTCGACGGTCGAGCAGTACCCGCTCTGA
PROTEIN sequence
Length: 185
MRLFVSVDLPDGMSGAVETVQERLRPASGLRFVDPEQAHVTVTFVGDVAEGKRETIDGAVERGVRRAGVEPFEVTYGGLGVFPSLEYISVVWLGVERGGDELGRLHEAVETETAGVGVDPESHEFTPHVTLARMDHAEGKNHVRQVVAEHAPTVGTTTVGAVRLKRSDLGPDGPAYSTVEQYPL*