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SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 13551-13600 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_12330
Species: Haloterrigena salina (50%)
2 1218 bp 72.17 16.50 100.49
sw_11_scaffold_12465
Species: halophilic archaeon J07HX64 (100%)
2 1209 bp 73.12 23.33 100.50
sw_11_scaffold_19328
Species: Leptospira santarosai (50%)
2 1606 bp 55.11 7.10 100.50
sw_11_scaffold_4188
Species: Natrialba hulunbeirensis (50%)
4 2594 bp 55.24 9.64 100.50
sw_11_scaffold_6180
Species: Natronomonas moolapensis (100%)
3 1994 bp 66.90 49.85 100.50
sw_11_scaffold_10373 3 1382 bp 53.76 5.72 100.51
sw_11_scaffold_10432
Species: Halosimplex carlsbadense (100%)
2 1376 bp 68.53 22.17 100.51
sw_11_scaffold_8776 4 1564 bp 42.46 6.14 100.51
sw_11_scaffold_13033 2 1173 bp 65.22 9.21 100.51
sw_11_scaffold_5750 5 2101 bp 51.83 5.19 100.52
sw_11_scaffold_8474
Species: Haloarcula vallismortis (66.67%)
3 2083 bp 62.55 22.42 100.53
sw_11_scaffold_9079
Order: Natrialbales (50%)
4 2047 bp 71.42 42.50 100.54
sw_11_scaffold_15203
Species: Flavihumibacter solisilvae (50%)
2 1853 bp 50.67 6.04 100.54
sw_11_scaffold_6531
Order: Flavobacteriales (50%)
4 2906 bp 48.35 6.47 100.55
sw_11_scaffold_14633
Species: uncultured archaeon A07HR60 (50%)
2 1077 bp 66.11 15.60 100.56
sw_11_scaffold_12063
Class: Halobacteria (66.67%)
3 1238 bp 40.55 4.12 100.57
sw_11_scaffold_10260
Species: Halogeometricum borinquense (50%)
2 1393 bp 68.05 14.00 100.57
sw_11_scaffold_15347
Species: Natronomonas moolapensis (66.67%)
3 1038 bp 72.83 17.34 100.58
sw_11_scaffold_12481
Class: Gammaproteobacteria (100%)
3 1208 bp 71.61 8.11 100.58
sw_11_scaffold_5264
Species: Marichromatium purpuratum (50%)
2 2234 bp 68.85 8.10 100.58
sw_11_scaffold_14847
Species: Halopiger xanaduensis (75%)
4 1870 bp 48.24 5.56 100.59
sw_11_scaffold_10662
Species: Haloarcula japonica (100%)
2 1354 bp 63.44 14.18 100.59
sw_11_scaffold_13106
Species: Halonotius sp. J07HN6 (50%)
2 1169 bp 53.64 6.24 100.60
sw_11_scaffold_13707
Species: Halogranum salarium (50%)
2 1133 bp 70.61 8.91 100.62
sw_11_scaffold_8362
Order: Halobacteriales (100%)
3 1616 bp 70.85 11.20 100.62
sw_11_scaffold_9481
Species: Haladaptatus paucihalophilus (66.67%)
3 1929 bp 73.98 35.82 100.62
sw_11_scaffold_14284
Species: Haloferax volcanii (66.67%)
3 1097 bp 56.15 5.47 100.64
sw_11_scaffold_8767
Species: Natronobacterium gregoryi (50%)
2 1565 bp 56.68 7.22 100.64
sw_11_scaffold_13416
Order: Halobacteriales (100%)
3 1705 bp 60.76 7.51 100.65
sw_11_scaffold_6878
Species: Halothece sp. PCC 7418 (100%)
3 1857 bp 45.23 7.59 100.65
sw_11_scaffold_4560 6 2450 bp 64.78 12.73 100.65
sw_11_scaffold_12317 3 1219 bp 52.83 9.35 100.66
sw_11_scaffold_15207
Species: Natronomonas pharaonis (50%)
2 1046 bp 61.76 16.44 100.67
sw_11_scaffold_12761
Species: Natronomonas pharaonis (50%)
2 1192 bp 68.79 58.72 100.67
sw_11_scaffold_12872
Species: Haloquadratum walsbyi (100%)
2 1186 bp 50.00 12.23 100.68
sw_11_scaffold_4405
Species: halophilic archaeon J07HX64 (66.67%)
3 2512 bp 64.49 12.38 100.68
sw_11_scaffold_11320
Genus: Halorubrum (50%)
4 1761 bp 68.09 13.23 100.68
sw_11_scaffold_15625
Order: Halobacteriales (66.67%)
3 1025 bp 68.78 22.54 100.68
sw_11_scaffold_15975
Species: Haloferax sulfurifontis (50%)
2 1010 bp 56.93 7.13 100.69
sw_11_scaffold_6790
Order: Halobacteriales (66.67%)
3 1874 bp 71.08 26.57 100.69
sw_11_scaffold_9895
Species: Dactylococcopsis salina (100%)
2 1433 bp 44.31 19.47 100.70
sw_11_scaffold_16182
Genus: Halorubrum (66.67%)
3 1001 bp 62.74 17.68 100.70
sw_11_scaffold_28681
Order: Halobacteriales (100%)
4 1278 bp 66.51 24.49 100.70
sw_11_scaffold_11400 2 1948 bp 49.08 6.93 100.72
sw_11_scaffold_14240
Species: Geofilum rubicundum (50%)
2 1099 bp 42.86 8.19 100.73
sw_11_scaffold_1976
Species: marine sediment metagenome (75%)
4 4235 bp 48.31 6.54 100.73
sw_11_scaffold_6860
Species: CSP1_3_Armatimonadetes (50%)
2 1861 bp 54.06 4.84 100.75
sw_11_scaffold_25501
Species: Haloarcula japonica (66.67%)
3 1191 bp 53.82 11.42 100.76
sw_11_scaffold_12957 2 1179 bp 40.03 5.77 100.76
sw_11_scaffold_7001
Species: Natronomonas pharaonis (50%)
2 1831 bp 69.63 35.94 100.76
Displaying items 13551-13600 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.