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SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 13601-13650 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_15587
Species: Nematostella vectensis (50%)
2 1027 bp 58.52 7.40 100.78
sw_11_scaffold_13455
Species: Environmental Halophage eHP-31 (50%)
2 1146 bp 41.62 4.54 100.79
sw_11_scaffold_10480
Species: RBG_13_RIF_OD1_08_41_18_curated (50%)
2 3176 bp 62.81 15.11 100.79
sw_11_scaffold_6682
Order: Halobacteriales (66.67%)
3 1896 bp 60.71 9.18 100.79
sw_11_scaffold_16200
Phylum: Bacteroidetes (100%)
3 1000 bp 46.70 5.70 100.80
sw_11_scaffold_8364
Genus: Natronomonas (60%)
5 1616 bp 65.90 41.89 100.80
sw_11_scaffold_9427
Order: Halobacteriales (100%)
3 1488 bp 68.35 11.63 100.81
sw_11_scaffold_7639
Genus: Halococcus (50%)
4 1726 bp 68.89 9.21 100.81
sw_11_scaffold_6391 4 1952 bp 57.27 6.40 100.82
sw_11_scaffold_14351
Species: Klebsiella pneumoniae (50%)
2 1092 bp 69.32 7.97 100.82
sw_11_scaffold_8715
Species: Salinibacter ruber (100%)
3 1571 bp 67.41 29.85 100.83
sw_11_scaffold_5465 3 2175 bp 47.40 7.54 100.83
sw_11_scaffold_5948
Species: Natronococcus amylolyticus (50%)
2 2050 bp 68.15 10.63 100.83
sw_11_scaffold_17013
Species: Haloarcula vallismortis (66.67%)
3 1324 bp 60.65 17.15 100.83
sw_11_scaffold_1958
Order: Haloferacales (60%)
5 6114 bp 60.06 19.79 100.83
sw_11_scaffold_6697
Phylum: Bacteroidetes (66.67%)
3 2975 bp 47.83 6.55 100.84
sw_11_scaffold_1903
Domain: Bacteria (66.67%)
3 4322 bp 51.90 6.76 100.86
sw_11_scaffold_10234
Species: gamma proteobacterium HTCC5015 (66.67%)
3 1395 bp 69.03 7.53 100.86
sw_11_scaffold_10239
Phylum: Proteobacteria (66.67%)
3 1395 bp 59.43 6.45 100.86
sw_11_scaffold_9268
Species: Caldanaerobacter subterraneus (50%)
2 1508 bp 46.49 4.91 100.86
sw_11_scaffold_4351
Species: Microspora stagnorum (50%)
2 2531 bp 40.30 33.82 100.87
sw_11_scaffold_15756
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1020 bp 57.84 8.04 100.88
sw_11_scaffold_16167
Species: Saccharophagus degradans (50%)
2 1002 bp 68.96 8.48 100.90
sw_11_scaffold_12285
Species: Desulfosporosinus sp. OT (50%)
2 1222 bp 66.04 6.79 100.90
sw_11_scaffold_20525
Species: Halorubrum hochstenium (50%)
2 1555 bp 71.96 10.16 100.90
sw_11_scaffold_9976 3 1424 bp 65.17 10.53 100.91
sw_11_scaffold_7381
Species: Natronomonas moolapensis (50%)
6 3478 bp 69.64 56.58 100.92
sw_11_scaffold_9624
Domain: Bacteria (66.67%)
3 1736 bp 64.80 7.60 100.92
sw_11_scaffold_8238
Domain: Bacteria (66.67%)
3 2351 bp 47.72 5.44 100.94
sw_11_scaffold_7088
Species: Natronomonas pharaonis (50%)
2 1816 bp 72.25 50.17 100.94
sw_11_scaffold_13069
Class: Halobacteria (66.67%)
3 1171 bp 58.50 15.88 100.94
sw_11_scaffold_7784
Genus: Natronomonas (50%)
6 1703 bp 65.83 27.95 100.94
sw_11_scaffold_7209
Genus: Haloarcula (66.67%)
3 1795 bp 66.63 15.82 100.95
sw_11_scaffold_16343
Species: Halovirus HHTV-1 (100%)
5 1795 bp 56.77 5.63 100.95
sw_11_scaffold_13315
Species: Natronomonas moolapensis (50%)
4 1156 bp 69.98 18.17 100.95
sw_11_scaffold_15151 3 1049 bp 60.15 5.15 100.95
sw_11_scaffold_15847
Species: uncultured marine microorganism HF4000_APKG8L7 (50%)
2 1016 bp 60.14 5.71 100.98
sw_11_scaffold_12723
Species: Acinetobacter radioresistens (50%)
2 1194 bp 47.32 4.94 101.01
sw_11_scaffold_11562
Species: Natrinema versiforme (50%)
2 1277 bp 76.59 12.29 101.02
sw_11_scaffold_20450
Domain: Bacteria (66.67%)
3 1535 bp 46.84 6.51 101.04
sw_11_scaffold_4340 2 4492 bp 50.20 7.86 101.05
sw_11_scaffold_15159
Species: Haloferax sulfurifontis (50%)
2 1048 bp 45.42 6.58 101.05
sw_11_scaffold_15360
Class: Halobacteria (50%)
4 1888 bp 66.37 8.05 101.06
sw_11_scaffold_7366
Species: Halosimplex carlsbadense (66.67%)
3 2342 bp 52.69 4.40 101.07
sw_11_scaffold_11181 3 1309 bp 49.81 6.65 101.07
sw_11_scaffold_13964
Species: Salinibacter ruber (50%)
2 1769 bp 57.60 10.01 101.07
sw_11_scaffold_15860
Species: Haloarcula amylolytica (50%)
2 1015 bp 59.31 11.63 101.08
sw_11_scaffold_14179
Species: Haladaptatus paucihalophilus (100%)
2 1623 bp 63.89 9.43 101.11
sw_11_scaffold_9562
Species: Pediococcus acidilactici (50%)
2 2364 bp 54.19 5.71 101.14
sw_11_scaffold_15311 3 1041 bp 50.14 6.72 101.15
Displaying items 13601-13650 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.