ggKbase home page
Advanced Search
Search Help

SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_14605
Species: Natrinema altunense (50%)
2 1079 bp 56.26 6.49 100.37
sw_11_scaffold_14368
Species: Halorubrum coriense (100%)
2 1091 bp 71.49 18.06 100.37
sw_11_scaffold_6608
Class: Halobacteria (100%)
3 1910 bp 59.79 9.48 100.37
sw_11_scaffold_14280
Species: Haloarcula argentinensis (50%)
2 1097 bp 67.27 15.59 100.37
sw_11_scaffold_14004
Species: Methanolacinia petrolearia (50%)
2 1115 bp 40.09 3.86 100.36
sw_11_scaffold_13847
Species: halophilic archaeon J07HX64 (100%)
2 1124 bp 72.06 22.86 100.36
sw_11_scaffold_7721
Species: Haloterrigena thermotolerans (100%)
2 1713 bp 51.72 7.30 100.35
sw_11_scaffold_13384
Species: Haloferax gibbonsii (50%)
2 1151 bp 73.94 15.03 100.35
sw_11_scaffold_24082
Class: Halobacteria (66.67%)
3 1731 bp 71.00 36.40 100.35
sw_11_scaffold_5013
Species: uncultured archaeon A07HR60 (66.67%)
3 2308 bp 68.02 36.09 100.35
sw_11_scaffold_4877
Species: halophilic archaeon DL31 (100%)
3 2897 bp 58.68 7.73 100.35
sw_11_scaffold_12851
Genus: Haloarcula (66.67%)
3 1187 bp 62.59 7.83 100.34
sw_11_scaffold_12484 3 1208 bp 42.63 3.48 100.33
sw_11_scaffold_20763
Class: Halobacteria (66.67%)
3 1226 bp 71.78 22.51 100.33
sw_11_scaffold_8994
Order: Halobacteriales (66.67%)
3 1540 bp 60.26 7.47 100.33
sw_11_scaffold_18115
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
2 1232 bp 68.91 21.59 100.33
sw_11_scaffold_12104
Species: Halobacterium sp. DL1 (50%)
2 1235 bp 63.97 6.80 100.32
sw_11_scaffold_3292
Species: Halococcus thailandensis (71.43%)
7 6567 bp 55.34 11.86 100.32
sw_11_scaffold_6755
Domain: Archaea (66.67%)
3 1881 bp 54.12 9.30 100.32
sw_11_scaffold_11593
Species: Halococcus thailandensis (50%)
2 1274 bp 58.87 74.49 100.31
sw_11_scaffold_25850
Species: Haloterrigena salina (50%)
2 1277 bp 73.22 45.11 100.31
sw_11_scaffold_8509
Species: Natronomonas moolapensis (66.67%)
3 1597 bp 68.38 43.83 100.31
sw_11_scaffold_11459
Species: Halorubrum phage GNf2 (50%)
2 1286 bp 46.97 5.37 100.31
sw_11_scaffold_6467
Species: Natronorubrum bangense (100%)
2 1935 bp 67.75 31.83 100.31
sw_11_scaffold_4140 6 4845 bp 50.05 6.58 100.31
sw_11_scaffold_5156
Domain: Bacteria (66.67%)
3 2264 bp 58.08 11.00 100.31
sw_11_scaffold_11317
Species: Haloarcula marismortui (50%)
2 1298 bp 71.57 20.57 100.31
sw_11_scaffold_11274
Species: Halogranum salarium (50%)
2 1301 bp 66.49 25.06 100.31
sw_11_scaffold_13216
Species: Natronomonas moolapensis (66.67%)
3 1956 bp 72.24 21.47 100.31
sw_11_scaffold_16141
Species: Haloarcula vallismortis (50%)
2 1002 bp 64.27 10.98 100.30
sw_11_scaffold_15884
Species: Limnoraphis robusta (50%)
2 1014 bp 41.81 4.54 100.30
sw_11_scaffold_15815
Species: Halobacterium sp. DL1 (100%)
2 1017 bp 46.90 5.21 100.30
sw_11_scaffold_15741
Species: Halorubrum lacusprofundi (50%)
2 1020 bp 69.61 21.37 100.29
sw_11_scaffold_15670
Species: Halorhodospira halochloris (50%)
2 1023 bp 70.77 9.29 100.29
sw_11_scaffold_15621
Species: Pseudomonas stutzeri (50%)
2 1026 bp 69.30 9.06 100.29
sw_11_scaffold_4714
Domain: Bacteria (66.67%)
3 2399 bp 44.52 6.71 100.29
sw_11_scaffold_15417 2 1035 bp 41.06 4.44 100.29
sw_11_scaffold_8500
Species: halophilic archaeon J07HX64 (66.67%)
3 2070 bp 70.87 12.37 100.29
sw_11_scaffold_15353 2 1038 bp 58.57 6.74 100.29
sw_11_scaffold_25161
Species: Salinibacter ruber (50%)
2 1047 bp 56.26 8.50 100.29
sw_11_scaffold_15977
Species: Natronomonas moolapensis (50%)
4 1397 bp 74.52 18.97 100.29
sw_11_scaffold_15027
Species: Halopiger xanaduensis (50%)
2 1056 bp 54.92 9.09 100.28
sw_11_scaffold_14739
Species: halophilic archaeon J07HB67 (50%)
2 1071 bp 72.55 14.75 100.28
sw_11_scaffold_9896
Species: Natrinema versiforme (50%)
2 1433 bp 72.71 13.82 100.28
sw_11_scaffold_14565
Species: halophilic archaeon J07HX64 (50%)
2 1080 bp 70.09 17.96 100.28
sw_11_scaffold_14506
Species: Natronomonas pharaonis (100%)
2 1083 bp 68.42 44.04 100.28
sw_11_scaffold_14413 2 1089 bp 51.33 3.95 100.28
sw_11_scaffold_14090
Species: Halorubrum distributum (50%)
2 1110 bp 62.34 29.73 100.27
sw_11_scaffold_27877
Species: Sphingobacterium sp. 21 (50%)
2 1113 bp 64.69 6.29 100.27
sw_11_scaffold_13969
Species: Haloferax mucosum (50%)
2 1116 bp 61.20 12.10 100.27
Displaying items 301-350 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.