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SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_10913
Species: Microcoleus sp. PCC 7113 (50%)
2 2609 bp 43.39 3.99 100.27
sw_11_scaffold_13869
Species: Spiribacter salinus (50%)
2 1122 bp 72.01 8.82 100.27
sw_11_scaffold_13678
Species: Halosimplex carlsbadense (100%)
2 1134 bp 64.02 13.49 100.27
sw_11_scaffold_13690
Species: Natronomonas moolapensis (100%)
2 1134 bp 73.90 38.54 100.27
sw_11_scaffold_9187
Species: Haloquadratum sp. J07HQX50 (50%)
2 1517 bp 52.54 7.51 100.26
sw_11_scaffold_9168
Species: Halococcus saccharolyticus (50%)
2 1520 bp 59.54 6.32 100.26
sw_11_scaffold_4538 3 4605 bp 37.85 4.32 100.26
sw_11_scaffold_13319
Species: Halobiforma lacisalsi (50%)
2 1155 bp 63.38 7.97 100.26
sw_11_scaffold_13276
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1158 bp 65.46 26.77 100.26
sw_11_scaffold_13282
Species: Halorientalis regularis (50%)
2 1158 bp 65.20 31.09 100.26
sw_11_scaffold_18713
Species: Haloarcula californiae (50%)
2 1556 bp 70.44 18.12 100.26
sw_11_scaffold_30362
Species: Haloferax volcanii (50%)
2 1170 bp 69.40 10.09 100.26
sw_11_scaffold_8714
Species: Haloferax elongans (100%)
2 1571 bp 55.95 10.69 100.26
sw_11_scaffold_6296
Order: Halobacteriales (66.67%)
3 1969 bp 73.18 16.40 100.25
sw_11_scaffold_12736
Species: Natronomonas moolapensis (50%)
2 1194 bp 74.12 27.30 100.25
sw_11_scaffold_6171
Species: Natronomonas moolapensis (50%)
6 1996 bp 71.49 43.84 100.25
sw_11_scaffold_8496
Species: Haloferax larsenii (100%)
2 1598 bp 57.63 8.82 100.25
sw_11_scaffold_8437
Species: halophilic archaeon J07HX64 (50%)
2 1607 bp 70.07 19.66 100.25
sw_11_scaffold_12254
Species: Halosimplex carlsbadense (50%)
2 1224 bp 75.82 16.50 100.25
sw_11_scaffold_6197
Order: Halobacteriales (100%)
3 2499 bp 69.83 41.06 100.24
sw_11_scaffold_24743
Species: Desulfonatronospira thiodismutans (50%)
2 1257 bp 55.61 12.09 100.24
sw_11_scaffold_24695
Species: Haloferax mediterranei (50%)
2 1266 bp 66.98 12.80 100.24
sw_11_scaffold_11547
Species: Natronomonas moolapensis (50%)
2 1278 bp 73.00 53.91 100.24
sw_11_scaffold_11475
Species: Candidatus Halobonum tyrrellensis (50%)
2 1284 bp 71.03 19.31 100.23
sw_11_scaffold_6964
Genus: Natronomonas (66.67%)
3 2161 bp 70.48 45.07 100.23
sw_11_scaffold_5484
Species: Natronomonas moolapensis (66.67%)
3 2170 bp 70.88 38.94 100.23
sw_11_scaffold_11082
Order: Natrialbales (66.67%)
3 1317 bp 69.63 18.53 100.23
sw_11_scaffold_20170
Species: Salinibacter ruber (50%)
2 1332 bp 62.69 6.46 100.23
sw_11_scaffold_10605
Species: Natronomonas pharaonis (50%)
2 1359 bp 69.83 32.01 100.22
sw_11_scaffold_24063
Species: Haloarcula argentinensis (50%)
2 1362 bp 75.70 14.98 100.22
sw_11_scaffold_10359
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1383 bp 70.14 7.23 100.22
sw_11_scaffold_10113
Species: Truepera radiovictrix (50%)
2 1407 bp 69.65 7.25 100.21
sw_11_scaffold_21540
Species: Halococcus thailandensis (50%)
2 1431 bp 55.77 10.90 100.21
sw_11_scaffold_9889
Species: halophilic archaeon J07HX64 (100%)
2 1434 bp 62.34 11.99 100.21
sw_11_scaffold_18383
Species: Halorubrum aidingense (50%)
2 1443 bp 73.18 29.66 100.21
sw_11_scaffold_11646
Species: Natronococcus jeotgali (50%)
2 1988 bp 72.54 76.01 100.20
sw_11_scaffold_16195
Species: Halovirus HHTV-1 (100%)
2 1000 bp 59.80 6.40 100.20
sw_11_scaffold_16209 2 1000 bp 41.70 5.70 100.20
sw_11_scaffold_16131
Species: Natronomonas moolapensis (100%)
2 1003 bp 70.99 38.48 100.20
sw_11_scaffold_9264
Species: Natronomonas moolapensis (50%)
4 1509 bp 68.72 54.47 100.20
sw_11_scaffold_16052
Species: Halorubrum kocurii (100%)
2 1006 bp 69.48 15.41 100.20
sw_11_scaffold_15998 2 1009 bp 39.94 4.96 100.20
sw_11_scaffold_15864
Species: Halomicrobium mukohataei (50%)
2 1015 bp 70.34 22.56 100.20
sw_11_scaffold_15795
Species: Halomicrobium mukohataei (50%)
2 1018 bp 69.94 25.93 100.20
sw_11_scaffold_15648
Species: Natrinema versiforme (66.67%)
3 1024 bp 72.46 8.50 100.20
sw_11_scaffold_9040
Species: Haladaptatus paucihalophilus (50%)
2 1536 bp 50.13 5.47 100.20
sw_11_scaffold_8953
Species: Salinibacter ruber (100%)
2 1545 bp 64.85 9.84 100.19
sw_11_scaffold_5899
Species: Halorubrum coriense (50%)
2 2060 bp 71.55 17.38 100.19
sw_11_scaffold_5888
Species: Halomicrobium mukohataei (50%)
2 2063 bp 56.33 13.52 100.19
sw_11_scaffold_15407 3 1036 bp 34.85 6.56 100.19
Displaying items 351-400 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.