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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20

Search features with annotation key words

Displaying items 91-120 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_91
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92727..94112)
DNA (1386bp) protein (462aa)
Tn7-like transposition protein C n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MTW3_9THEO rbh
Tn7-like transposition protein C
Tn7-like transposition protein C {ECO:0000313|EMBL:AEM79498.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="T rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_92
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94093..96156)
DNA (2064bp) protein (688aa)
UPI0003D61B2C related cluster n=1 Tax=unknown RepID=UPI0003D61B2C rbh
Integrase catalytic region {ECO:0000313|EMBL:ETI91660.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;" rbh
integrase catalytic subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_93
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96140..96961)
DNA (822bp) protein (274aa)
UPI0003D5E62C related cluster n=1 Tax=unknown RepID=UPI0003D5E62C rbh
TnsA endonuclease {ECO:0000313|EMBL:ETI91661.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;" rbh
Tn7-like transposition protein A
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_94
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(97610..98002)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7F9_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsI; 30S ribosomal protein S9
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_95
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(98028..98456)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY8_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplM; 50S ribosomal protein L13
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_96
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98774..99514)
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy rbh
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium ultunense Esp RepID=M1Z647_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_97
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99523..100320)
DNA (798bp) protein (266aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridium ultunense Esp RepID=M1YSH5_9CLOT rbh
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1288971 species="Bacte rbh
cbiQ1; cobalt transporter permease protein CbiQ
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_98
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100313..101176)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP- rbh
cbiO1; cobalt transporter ATP-binding protein CbiO (EC:3.6.3.-)
Energizing coupling factor of ABC influx transporter (ATP-binding protein) n=1 Tax=Clostridium ultunense Esp RepID=M1Z6Z3_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_99
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101173..101994)
DNA (822bp) protein (274aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP- rbh
cbiO2; cobalt transporter ATP-binding protein CbiO (EC:3.6.3.-)
Energy-coupling factor transporter ATP-binding protein EcfA 2 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7F1_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_100
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(102303..102644)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY3_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplQ; 50S ribosomal protein L17
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_101
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102668..103615)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase rbh
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZL2_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_102
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(103684..104307)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6Y8_9CLOT rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
rpsD2; 30S ribosomal protein S4
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_103
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(104323..104721)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7E6_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsK; 30S ribosomal protein S11
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_104
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(104740..105102)
DNA (363bp) protein (121aa)
30S ribosomal protein S13 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY1_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
30S ribosomal protein S13
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_105
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105158..105271)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Desulfitobacterium hafniense RepID=RL36_DESHD
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_106
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105288..105506)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Clostridium ultunense Esp RepID=M1Z637_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
infA; translation initiation factor IF-1
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_107
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105537..105818)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YSG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93505.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_108
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105889..106536)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033 rbh
adk; adenylate kinase Adk (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQT0_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_109
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106556..107830)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecY n=1 Tax=Clostridium ultunense Esp RepID=M1Z7E0_9CLOT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.; rbh
secY; preprotein translocase subunit SecY
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_110
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(107831..108280)
DNA (450bp) protein (150aa)
50S ribosomal protein L15 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX7_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
50S ribosomal protein L15
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_111
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(108299..108475)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZZ0_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_112
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(108489..108995)
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Clostridium ultunense Esp RepID=M1YSF6_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsE; 30S ribosomal protein S5
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_113
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(109013..109375)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2T9_CLOA9
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / D
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_114
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(109392..109931)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7D4_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
50S ribosomal protein L6
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_115
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(109965..110360)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX4_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
30S ribosomal protein S8
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_116
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(110392..110577)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KZA4_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
RpsN; 30S ribosomal protein S14
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_117
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(110596..111138)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Clostridium ultunense Esp RepID=M1YSF4_9CLOT rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
rplE; 50S ribosomal protein L5
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_118
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(111165..111479)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6W8_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rplX; 50S ribosomal protein L24
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_119
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(111495..111863)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7D0_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
50S ribosomal protein L14
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_120
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(111893..112147)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX0_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpsQ; 30S ribosomal protein S17
Displaying items 91-120 of 130 in total

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