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NECEvent2014_4_3_Actinomyces_59_538_scaffold_4_281

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 317267..320848

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 999.99
  • Bit_score: 2084
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W8I0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 999.99
  • Bit_score: 2084
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1735
  • Evalue 0.0

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3582
GTGCCCGCACGCGAGACCAGCGCTAAGTGTGCTAGCGACACAGTATCAGATAGGGGCGGCAGGCGGGAGCGCGCACTCACCGACTGCAGGGAAGGACACCCTTTGGCTGCCAGTAGCACCACTGCACATCAGCCCAGGAACCGTATCTCATTTGCGAAGCTTCGCGAACCTTTGCAGGCCCCGAACCTGCTGGGTCTGCAGATTCAGAGCTTCGACTGGCTTCTGGGGAACGACAATTGGAAACAACGCGTTGAGGCTGCGAAAGCTTCAGGCGGATTCGACGTGCCGGACGTTTCCGGGCTGGAAGAAATCTTCCAGGAGATCTCGCCGATTGAAGACGTCGCACAAACCATGTCATTGTCATTCCGCGACCATCGACTCGAACGCCCGAAGTACTCGGTCGAAGAGGCAAAGGCCAAGGATTACACGTACTCAGCACCGATGTACGTCACCGCCGAGTTCATGAATTACATGACCGGCGAAATCAAGTCGCAGACCGTCTTCATGGGTGACTTCCCCCTGATGACCAAGCGCGGCACTTTCATCATTAACGGCACGGAGCGCGTCGTCGTCTCCCAGCTGGTCCGTTCGCCTGGCGTGTACTTCGAGCGCACATCTGACCGCTCCTCCGATAAGGAAATCTTCGGAGCCAAAGTCATCCCCAGCCGCGGTGCCTGGCTCGAATTCGAGATCGACAAGCGCGACGCAGTGGGTGTGCGTATCGACCGCAAGCGTAAGCAGTCGGTGACTCACTTCCTCAAGGCTATCGGCATGACCGAAGCTGAGATCCGTGAACAGTTCGCGGACTACCCGGTTTTGCTGGAAACCCTTGAGAAGGACACGGTCGACACCCAGGAGGAAGCTCTCCTGGATATCTACCGCAAGATTCGCCCCGGTGAGCCCGCAGTCGTCGACGCAGCTCAGACACTGCTGAATAACTTCTACTTCGATTCCAAGCGCTACGACCTGGCGAAGGTTGGCCGCTACAAGATCAACAAGAAGCTGGCTCTGGATGCGGATCCTCGTACCTCCGTTCTGACGCTGGAAGACATCGTCACGACCATCAAATACATGCTCTCGATGCATAAGGGTGACAAGACGTTCACCGGCGTGCGTGGCGGCAAAGCCGTGGAAGTCAGCGTTGAGTCGGACGATATTGACCACTTTGGTAACCGTCGTATCCGCGCGGTGGGCGAACTGATCCAGTCGCAAGTGCGTACCGGCCTGGCGCGCATGGAACGCACCGTGCGTGAACGCATGACAACGCAGGAAGCCGATTCGATCACGCCTCAGTCGCTGATCAATATCCGCCCCGTTGTCGCAGCGATCAAGGAGTTCTTCGGAACATCCCAGCTGTCACAGTTCATGGATCAGAACAACCCGCTGGCCGGTTTGACGCACAAGCGCCGCCTGTCGGCACTGGGCCCTGGCGGTCTGTCGCGTGACCGTGCCGGCATGGAGGTCCGTGACGTTCACCCGTCGCACTACGGACGCATGTGCCCGATTGAAACCCCTGAAGGCCCAAACATTGGTCTGATCGGCACGATGGCGACGTTCGCGCGCATCAACCCCTTCGGTTTCATCGAGACGCCGTACCGCGTGGTGCGTGGCGGCCACGTCACCGACGAGGTCGAGTACCTGACCGCTGATGACGAGAACGGCCACTACATCGCTCAGGCATCATCGCCGCTGACGGAGGACAACACTTTTGCCGAAGAGATGGTTCTGTGCCGTCTCTCCGGCGAAGACCCGTTGCTCGTTGCACGCGACGACGTTGACTACATGGACGTTTCTGCACGTCAGATGGTCTCTGTTGCCACCGCGTTCATCCCGTTCCTCGAGCACGATGACGCCAACCGAGCCCTGATGGGCGCGAACATGCAGCGCCAGGCTGTCCCGTTGCTGCGCACCGAAGCCCCACTGGTCGGCACCGGCATGGAACGCCGCGCCGCTCAGGACTCAGGCGAAATGGTGATCGCTGAGCGCGCCGGTGTCGTCACCGAGGTCAGCGCCGACTTGATCGTCGTTGAAACTGACGAGGGTGGCCGCGACACCTACCGACTCGAAAAGTTTGAACGCTCCAACCCCGGCAACTGCACGAACCAGCGTGTCATTGTCGAGGAAGGCCAACGCGTTGAAGAAGCAGACGTTCTGGCTGATGGCCCGGCCACCGACAACGGTGAAGTCGCCCTCGGAAAGAACCTGCTGGTCGCCTACATGTCGTGGGAAGGCCTGAACTACGAGGATGCCGTGATTCTGTCACGCCGCGTCGTGCAGGATGACGTCCTGACCTCCATCCATATTGAGGAGTACGAGGTTGACGCCCGCGAAACGAAGCTGGGCGACGAGGAAATCACGCGCGACATTCCGAACGTGTCCGAGGAATCACTGGCTGACCTTGACGAACGCGGCATCATCCGCATCGGTGCTGAGGTTCAGGCCGGCGACATCCTGGTCGGCAAGGTCACCCCGAAGGGTGAAACCGAACTGACCAGTGAGGAGCGCCTGCTGCGCGCCATCTTCGGTGAGAAGGCGCGCGAAGTGCGCGACACCTGCCTGCGTGTCCCACACGGTGAAGAGGGCATCGTCATTGGCGTGCGCGAGTTCAATGACGAAGAAGACGATCTGAACCCCGGCGTGCGCCAGACGGTGCGCGTGTACGTGGCTCAGCGCCGCAAGATCACCATTGGTGACAAGATGGCTGGCCGTCACGGAAACAAGGGAGTCGTCTCCAAGATTCTGCCTGTCGAAGACATGCCGTTCCTGGAAGATGGCACACCTGTGGACATCATCTTGAATCCGCTGGGTGTTCCTGGACGTATGAACGTCGGTCAGGTGCTCGAGTACCACCTCGGCTGGCTGGCCCACCAGGGTTGGGATGCCACGAAGGCGAAGGAAGCTGGCGAAGACTGGACGAAGTTCCTGCCTGAGAACGGCATCAGCGCCGAGCCCGGCTCCTTGGTTGCAACCCCCGTGTTCGACGGTCTGGAAGCAGAGGAGCTGCAAGGCCTGCTGCGTTCAGTTCGTCCCAACCGTGATGGAGAGCGCTTGACCAACGATGAAGGTAAAGCTCAGCTGTTTGATGGCCGTTCGGGTGAACCGTTCCCGTACCCCATCGCAGTGGGGTACGCCTACATGCTCAAGCTGCACCACTTGGTTGACGACAAGATTCATGCCCGTTCAACCGGCCCGTACTCGATGATTACGCAGCAGCCGCTGGGTGGTAAAGCCCAGTTCGGTGGCCAGCGCTTCGGCGAGATGGAGGTGTGGGCACTGGAGGCCTACGGTGCCGCCTACGCCCTCCAGGAGCTGCTCACCATCAAGTCGGACGACACCGTTGGACGTGTCAAGGTCTACGAAGCCATTGTCAAGGGTGAAGACATCCCGGAACCTGGTATTCCAGAGTCCTTCAGGGTCCTCATCCAGGAAATGCGCTCGCTGTGCTTGAACGTTGAAGCACTCGACGCGGCAGGCAACCCGATTGACCTGCGCGACGAGGACGAATCGTACGATGCGCAAGAGGATATGGGCATCACCTTGGATGCCCGTCCGAACGCAGCAGCAACCATTGACGCCATTTAA
PROTEIN sequence
Length: 1194
VPARETSAKCASDTVSDRGGRRERALTDCREGHPLAASSTTAHQPRNRISFAKLREPLQAPNLLGLQIQSFDWLLGNDNWKQRVEAAKASGGFDVPDVSGLEEIFQEISPIEDVAQTMSLSFRDHRLERPKYSVEEAKAKDYTYSAPMYVTAEFMNYMTGEIKSQTVFMGDFPLMTKRGTFIINGTERVVVSQLVRSPGVYFERTSDRSSDKEIFGAKVIPSRGAWLEFEIDKRDAVGVRIDRKRKQSVTHFLKAIGMTEAEIREQFADYPVLLETLEKDTVDTQEEALLDIYRKIRPGEPAVVDAAQTLLNNFYFDSKRYDLAKVGRYKINKKLALDADPRTSVLTLEDIVTTIKYMLSMHKGDKTFTGVRGGKAVEVSVESDDIDHFGNRRIRAVGELIQSQVRTGLARMERTVRERMTTQEADSITPQSLINIRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLIGTMATFARINPFGFIETPYRVVRGGHVTDEVEYLTADDENGHYIAQASSPLTEDNTFAEEMVLCRLSGEDPLLVARDDVDYMDVSARQMVSVATAFIPFLEHDDANRALMGANMQRQAVPLLRTEAPLVGTGMERRAAQDSGEMVIAERAGVVTEVSADLIVVETDEGGRDTYRLEKFERSNPGNCTNQRVIVEEGQRVEEADVLADGPATDNGEVALGKNLLVAYMSWEGLNYEDAVILSRRVVQDDVLTSIHIEEYEVDARETKLGDEEITRDIPNVSEESLADLDERGIIRIGAEVQAGDILVGKVTPKGETELTSEERLLRAIFGEKAREVRDTCLRVPHGEEGIVIGVREFNDEEDDLNPGVRQTVRVYVAQRRKITIGDKMAGRHGNKGVVSKILPVEDMPFLEDGTPVDIILNPLGVPGRMNVGQVLEYHLGWLAHQGWDATKAKEAGEDWTKFLPENGISAEPGSLVATPVFDGLEAEELQGLLRSVRPNRDGERLTNDEGKAQLFDGRSGEPFPYPIAVGYAYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDTVGRVKVYEAIVKGEDIPEPGIPESFRVLIQEMRSLCLNVEALDAAGNPIDLRDEDESYDAQEDMGITLDARPNAAATIDAI*