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13_1_40cm_4_scaffold_2614

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2614_1
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(43..834)
DNA (792bp) protein (264aa)
ABC transporter related n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H5_METB6
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABS55686.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boon
13_1_40cm_4_scaffold_2614_2
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(831..1769)
DNA (939bp) protein (313aa)
Periplasmic solute binding protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H6_METB6
periplasmic solute binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABS55687.1}; Flags: Precursor;; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula
13_1_40cm_4_scaffold_2614_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2028..2399
DNA (372bp) protein (124aa)
Putative nickel-responsive regulator 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN4_NITGG
nickel-responsive regulator 1
Putative nickel-responsive regulator 1 {ECO:0000313|EMBL:AFU56980.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_4_scaffold_2614_4

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comp(2422..3279)
DNA (858bp) protein (286aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EQD46427.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PEP phosphonomutase-like protein
13_1_40cm_4_scaffold_2614_5
unknown

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comp(3299..3697)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_6
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3814..4404
DNA (591bp) protein (197aa)
Methyltransferase {ECO:0000313|EMBL:AKB12226.1}; EC=2.1.1.- {ECO:0000313|EMBL:AKB12226.1};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methan
Putative methyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW41_METPS
putative methyltransferase
13_1_40cm_4_scaffold_2614_7
unknown

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4811..4975
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_8
unknown

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5162..5407
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_9
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5483..5971
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFJ5_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16043.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" sour
13_1_40cm_4_scaffold_2614_10
unknown

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comp(6006..6170)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6704..7018
DNA (315bp) protein (105aa)
dioxygenase, ferredoxin subunit id=14425696 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
dioxygenase, ferredoxin subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
13_1_40cm_4_scaffold_2614_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7428..8039
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_40cm_4_scaffold_2614_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8047..9543)
DNA (1497bp) protein (499aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Brevibacillus sp. CF112 RepID=J3B857_9BACL
rsmB; 16S rRNA (5-methyl-C967)-methyltransferase
13_1_40cm_4_scaffold_2614_14
RBG_16_Archaea_50_20_curated, Archaea

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9577..12198
DNA (2622bp) protein (874aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_40cm_4_scaffold_2614_15
RBG_16_Archaea_50_20_curated, Archaea

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12203..12952
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDA3_THET1
F420-dependent oxidoreductase
13_1_40cm_4_scaffold_2614_16
RBG_16_Archaea_50_20_curated, Archaea

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13025..14188
DNA (1164bp) protein (388aa)
Amidohydrolase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B5U0_ACIHW
metal-dependent carboxypeptidase Tax=RBG_16_Archaea_50_20_curated
amidohydrolase
13_1_40cm_4_scaffold_2614_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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14253..15320
DNA (1068bp) protein (356aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
Myo-inositol-1-phosphate synthase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E6K4_9FIRM
Myo-inositol-1-phosphate synthase
13_1_40cm_4_scaffold_2614_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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15317..16093
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Putative Orotidine 5'-phosphate decarboxylase / HUMPS family protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6B14 RepID=B3T8S5_9ARCH
13_1_40cm_4_scaffold_2614_19

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comp(16100..16252)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI000366BD75
Marine sediment metagenome DNA, contig: S01H1_L07576 {ECO:0000313|EMBL:GAF74111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcriptional regulator
13_1_40cm_4_scaffold_2614_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16375..16716
DNA (342bp) protein (114aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_4_scaffold_2614_21
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16713..16952)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK15266.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermoph
13_1_40cm_4_scaffold_2614_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(17106..18227)
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_4_scaffold_2614_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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18827..20476
DNA (1650bp) protein (550aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome Tax=RBG_13_Bathyarchaeota_38_9_curated
ths; archaeal thermosome
13_1_40cm_4_scaffold_2614_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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20466..20765
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-directed RNA polymerase subunit K n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1X4_FERFK
RNA polymerase Rpb6
13_1_40cm_4_scaffold_2614_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(21005..21514)
DNA (510bp) protein (170aa)
SSU ribosomal protein S18P alanine acetyltransferase n=1 Tax=Metallosphaera cuprina (strain Ar-4) RepID=F4G1M2_METCR
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_1_40cm_4_scaffold_2614_26
unknown

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21737..22879
DNA (1143bp) protein (381aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_27
unknown

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23548..23874
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_28
unknown

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23959..25089
DNA (1131bp) protein (377aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_29
unknown

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25097..25240
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_2614_30
unknown

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comp(25671..25838)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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