ggKbase home page

13_1_40cm_4_scaffold_1409_1

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 70..939

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_ similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 287.0
  • Bit_score: 465
  • Evalue 4.30e-128
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 288.0
  • Bit_score: 464
  • Evalue 6.90e-128
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 292.0
  • Bit_score: 350
  • Evalue 4.10e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCGCGGACCTTGTCGAGCGAGAACGGCAGCGGCAAGGAGCTGGTCGCGCGCGCGATCCACGCGCAGTCGGCGCGCCGCGAGCGCCCGTTCGTCGAGGTGAACTGCGCCGCGATCCCCGAGGAGCTGATCGAGTCGGAGCTGTTCGGCCACGAGAAGGGCGCCTTCACGGGCGCGCTCGCCCGGCGGCGCGGCCGCTTCGAGCTGGCCGATCGCGGCACACTCTTCCTCGACGAGATCGGCGACATGAGCGTGAAGACCCAGGCCAAGGTGCTCCGCGCGCTCGAGGAGCAGGCCTTCGAGCGCGTCGGCGGCCGCGAGACCATCAAGGTGGACGTGCGGGTGATCGCCGCGTCCAACCGCGATCTGCAGTCCCTCATCGCGGCCGGACGCTTCCGGGAGGACCTCTTCTACCGGCTCAACGTCATTCCCATCGAGGTGCCGGCGCTTCGCGTGCGACAAGACGACCTGCCGCAGCTCGTCGACCACTTCGTCCGGGTCTTCTGCGCGGAAAACGGCAAGCGCGTGAAAACCCTCTCCGGCGACGCCCTCGCGTACCTGCTGGCCTACGACTGGCCCGGCAACGTGCGCGAGCTGCGGAACCTGGTCGAGCGGCTGGTGATCATGTCGCCCCGCGACGTCATCGGCGTCGAGGACCTGCCGCCGCCCGTCCGGCCCAAGGAGGCGGTGGCCGGTGACGCCCGCGAGCGCTCGCTGCGTGAGGCGCGCGACAACTTCGAGCGCGCCTACATCCTGGCCGAGCTGCGCGCGAGCGAGTGGAACATGACGCGCACGGCCGAGCGGCTCGGCATCGAGCGCAGCCACCTCTACCGCAAGCTGAAGTCCTACAACATCACGCCTCCGAAGTGA
PROTEIN sequence
Length: 290
MARTLSSENGSGKELVARAIHAQSARRERPFVEVNCAAIPEELIESELFGHEKGAFTGALARRRGRFELADRGTLFLDEIGDMSVKTQAKVLRALEEQAFERVGGRETIKVDVRVIAASNRDLQSLIAAGRFREDLFYRLNVIPIEVPALRVRQDDLPQLVDHFVRVFCAENGKRVKTLSGDALAYLLAYDWPGNVRELRNLVERLVIMSPRDVIGVEDLPPPVRPKEAVAGDARERSLREARDNFERAYILAELRASEWNMTRTAERLGIERSHLYRKLKSYNITPPK*