ggKbase home page

13_1_40cm_4_scaffold_4430_17

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 15454..18354

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 969.0
  • Bit_score: 1445
  • Evalue 0.0
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 816.0
  • Bit_score: 821
  • Evalue 3.60e-235
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 968.0
  • Bit_score: 1441
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2901
GTGACGCCGAGCGGGCGGTCGTCTGTCGTCGGTTGCTCGCCGGCGAGCCTCGACGTCACGCTGCCTACGCCGGCGGCGTTTCGCGCGGCGACGCTGCGCTTCACGACCGGCGACAGCCTCGATCGCGAGCTCCTGGTCGAAGCGCTGGACAAGGCCGGCTACGAGCGGACGGAGACCGTCGTCGAGGTCGGCCAGTGGAGCGTGCGCGGCGGCATCGTCGACGTCTTCTCGCCGGCCCAGGCCGCGCCGGCACGGCTCGAGTTCTTCGGTGACGAGATCGAATCGATCAGGCTCTTCGATCCGACGTCACAGCGCTCGCAGGCCACGCTCGACGAGCTGCTCGTGCTTCCGTTGCACGACGAGGGCGTCGACGCGGGCGGGCGCGGCCTCCTCGACTATCTGCCGCCGACGGCCGCCGTGGTCGTCGACTCGCCGAAATTGCTCGACGCCACGGACGCGGAAGCGCCCGAGCGACCACCGCTCGCCCAGCGCATCGCCGGCCGCCAACGGGTGGAGCTGGAGCTGGTCGAGGGCGCCACCGGCCCGGCCGGTCTCACGCTCGACACGCGCTCGGTGACGCAGTACGCGGGGAAGTTCACCCAGCTGGCGGAGGAGATCGCCGGCTGGCGTCGCGAAGGCTTCACGGTGAGGCTGGCGGCGGCCGACGACCGGCAAGCCGAGCACGTCCAGCAGATCCTGCGTGAGCACGGCGTGGAGGCGCTACGGGCCGCGGCCATCGACGCTCCCGAAGGACTGGCCATCGTCGTCGGCGAATGCTCGTCGGGATTCTCGATCCCCGCGCTCGGCCTGATCCTCCTCACCGAGACCGAGATGTTCGGCGCCCGGCGGCGCACGCTGCGGCGTCCGAAGTACCAGCGGGGCTCGCCCATCAGTGCCTTCACCGACCTCGAGGTCGGCGACCTCGTGGTCCACGAGGACCACGGTATCGGACGGTATCTCGGGCTCAAGACGATGGCGGTGGGTGACCGTGACGGCGACTTCCTGCTCCTCGAGTATGCCGAGAACAACCGTCTCTATCTCCCCGTCGATCGGCTCGACCTGATCTCGAAGTACATGGGCGGCGATGTCACCGCGGCGCGCCTCGACCGGCTGGGCGGCGCGTCCTGGCAGCGGGTGAAGGACTCCGTGCGCGCGGCCCTGCGGGAGATGGCCGAGGAGCTCCTCCGGCTCTACGCCAAGCGCACGGTTGCCGAGGGCCATCGCTTCGCGTCCGACACGCCCTGGCAGCGCGAGTTCGAGGCGGCGTTCCGGTTCGAGGAGACGACCGACCAGCTCCGCGCCATCGAGGACGCCAAGCGCGACATGGAAGGCGAGCGGCCGATGGACCGCCTCGTCGCCGGCGACGTCGGCTATGGCAAGACCGAGGTCGCGCTCCGCGCCGCGTTCAAGGCCGTGGCCGACGGCACCCAGGTCGCGGTGCTGGTCCCCACCACCGTGCTGGCTCAGCAGCACTGGTCGACGTTCGTGGATCGCTTCGGCGCGTTCCCGGCCAAGGTCGAGCTGCTCTCACGCTTCCGCTCGCCGGTCGAGCAGAAGGCCGTGGTCGAGGGACTCCGGCAGGGCACGGTCGACGTCGTCATCGGCACCCATCGCTTGCTTTCCAAGGACGTCGAGTTCAAGAACCTCGGCCTCCTGATCATCGACGAGGAGCATCGCTTCGGCGTCGCGCACAAGGAGCGCCTCAAACAGTTCCGGGCCGCGGTGGACGTGCTCGCGCTCACGGCCACGCCGATCCCCCGGACGCTGTACATGTCGCTCTCCGGTGTGCGTGACATGTCGGTGATCGAGACGCCACCGCTCGATCGGCTACCGGTGGACACCGTGCTCAGGCGTTTCTCGAAAGCCGTGATCAAGGAGGCGGTCGAGCGGGAGCTCCGCCGGGGCGGGCAGGTCTTCTTTGTCCACAACCGGGTCCAGTCGCTCCCGTCGATGGCGCGCCTCGTCCAGGAGCTCGTGCCCGACGCGCGTATCGTCATGGCGCACGGCCAGATGCGCGAGCGTGAGCTGGAAGCGACGATGGTGAAGTTCGTGAGCGGCCAGGCCGACGTGCTGGTATCGACGGCGATCATCGAATCCGGGCTCGACATCCCGGCCTCCAACACGATCATCGTCAACCGGGCCGACCGGTTCGGACTCGCCCAGCTCTACCAGCTGCGGGGCCGGGTCGGGCGCGAGCGCCAGCAGGCGTACTGCTACCTGCTCGTCCCCGCCGACGGGCGGGTCGACGAGCAAGCCCAGCGCCGGTTGCGCGTCCTGCAGGAGCTGACGGAGCTCGGCTCCGGTTTCAAGCTGGCCCTCCGTGACCTCGAGATCCGTGGGGCCGGGAACCTCCTGGGGGCGCAACAGCATGGTCACATCGCGGCCGTGGGCTTCGATCTTTATTCGAAGCTCCTGGCCGAGGCCGTGGCAGAATTGAAGGGCGAACCGGCGGCTGCGACCATCGAGCCGGTGATCAGCGTCAACACTGAAGGATTCTTGCCGGAAGACTATGTCCCCGAGGTCAATCAGCGACTGGCCTTCTACAAGCGTCTGGCCGGTGCCAGCGGCGACGACGCCGTCGCCGATCTCCGCGCCGAGCTGGCCGACCGCTTCGGGCCTCCGCCGCACGAGGTCGAGCAGCTCCTCGACATCGTGCGCATCCGGGGGGCCGCGCGGAACCTCGGGATCGAGCGTATCGAGGCCGGGGCCGGCCGCGCGCTCCTCACGTTCGCCCCGTCCACCAAGGTGGAGCCGGCCACGCTCGTCGGGCTCGTGCAGAAGAGCCGCGGGCGTCTGGCCATGAAGCGTGAGTTCACCCTCGACGCCGTGATCGCTCGCGGAGAGTGGCCGGCGGTGCGGGACGCAGTCCTCGCGCTGCTGGCCGAGATCGCTCGCGGATGA
PROTEIN sequence
Length: 967
VTPSGRSSVVGCSPASLDVTLPTPAAFRAATLRFTTGDSLDRELLVEALDKAGYERTETVVEVGQWSVRGGIVDVFSPAQAAPARLEFFGDEIESIRLFDPTSQRSQATLDELLVLPLHDEGVDAGGRGLLDYLPPTAAVVVDSPKLLDATDAEAPERPPLAQRIAGRQRVELELVEGATGPAGLTLDTRSVTQYAGKFTQLAEEIAGWRREGFTVRLAAADDRQAEHVQQILREHGVEALRAAAIDAPEGLAIVVGECSSGFSIPALGLILLTETEMFGARRRTLRRPKYQRGSPISAFTDLEVGDLVVHEDHGIGRYLGLKTMAVGDRDGDFLLLEYAENNRLYLPVDRLDLISKYMGGDVTAARLDRLGGASWQRVKDSVRAALREMAEELLRLYAKRTVAEGHRFASDTPWQREFEAAFRFEETTDQLRAIEDAKRDMEGERPMDRLVAGDVGYGKTEVALRAAFKAVADGTQVAVLVPTTVLAQQHWSTFVDRFGAFPAKVELLSRFRSPVEQKAVVEGLRQGTVDVVIGTHRLLSKDVEFKNLGLLIIDEEHRFGVAHKERLKQFRAAVDVLALTATPIPRTLYMSLSGVRDMSVIETPPLDRLPVDTVLRRFSKAVIKEAVERELRRGGQVFFVHNRVQSLPSMARLVQELVPDARIVMAHGQMRERELEATMVKFVSGQADVLVSTAIIESGLDIPASNTIIVNRADRFGLAQLYQLRGRVGRERQQAYCYLLVPADGRVDEQAQRRLRVLQELTELGSGFKLALRDLEIRGAGNLLGAQQHGHIAAVGFDLYSKLLAEAVAELKGEPAAATIEPVISVNTEGFLPEDYVPEVNQRLAFYKRLAGASGDDAVADLRAELADRFGPPPHEVEQLLDIVRIRGAARNLGIERIEAGAGRALLTFAPSTKVEPATLVGLVQKSRGRLAMKREFTLDAVIARGEWPAVRDAVLALLAEIARG*