ggKbase home page

13_1_40cm_2_scaffold_1238_10

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(10342..11694)

Top 3 Functional Annotations

Value Algorithm Source
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RBG_16_Ac similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 480.0
  • Bit_score: 669
  • Evalue 4.00e-189
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27) similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 481.0
  • Bit_score: 551
  • Evalue 2.50e-154
methylmalonate-semialdehyde dehydrogenase id=24563983 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 480.0
  • Bit_score: 559
  • Evalue 2.40e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGAAAACCCTCCGCAACTATGTCGGCGGCGAGTGGCTCAGTCCTGCCGCTAACGCCTACCTGGACATCACGAACCCAGCGACGGGCGAACAGCTCGGCAGGGTGCCGCTCTCGGGCACGCGCGAAGTCGAGCAGGCGGTCGCGGCTGCGCAGACAGCGTTCCTCAAGTGGCGTGAAGTCCCACCGGTCGTCCGGGCCCGTTACCTGTTCAAGCTCAAGTTCTTGATGGAGGAGCAGTTCGAGGACCTCGCCGCCACCGTCACGCGCGAGAACGGCAAGACGCTGGACGAGGCCAGGGGGTCGGTGCGCCGCGGGATCGAGAATGTCGAGCACGCCTGCGGCATCCCGACCCTGATGGTCCGCCAGCCGCTCGGCGTCTTCGCCGCGATCACGCCGTTCAATTTCCCGGCGATGGTGCCGTGCTGGTTCTGGCCCTATGCGATCGCGACCGGCAACACGTTCATTCTCAAGCCGAGCGAGCAGGTGCCCTTTTCGCCGACCCGCCTTGTCGAATTGGCGCACGAGGCCGGCATTCCGCCCGGCGTCCTGAACCTGGTCCATGGAGGGAAGGACGCGGTCAACGCGCTGCTCGCGCACCCAGGGATCGCCGGGATCTCGTTCGTCGGCTCATCCCCCGTCGCGAAGCACGTCTACCAGGAAGCCGCCGCACACGGCAAGCGCGTCCAGGCGCTCGGCGGCGCGAAGAATCACGTCGTGGTGATGCCCGACGCCGATATGGATCGCGCGGTCGCGAACGTCACCGAATCGATGTTCGGGTGCGCCGGCCAGCGTTGCCTGGCGGGGAGCGTGGTCGTGGCGGCCGGCAAGGCGTACGAGCCGTTCCGCGACAAGCTCCTGAGCGCGGCGAAGGATCTGCGGCTCGGCTACGGTCTCGAGCCCGGCGTCAACATGGGCCCTGTCATTTCCGCACGGCACAAGGAGAAAGTGCTGTCCTACGTCGAGGCCGGGCGTAAGGACGGGGCGACGCTGCTGCTCGACGGCCGGGGCACGAAGGTCGAGAAGCATCCGCGGGGCCACTTCGTCGGGCCGACCGTGTTCGACGGCGTTCAGCCCGACATGACGATTGGGAAGGAAGAGATCTTCGGGCCGGTCGCGTCGGTCACGCACGTCAGCAATCTCGACGAAGGAATCGAGATGGTGCAGCGCTCGGGCTTTGCCAATGCGACGTCGATCTTCACGCAGAGCGGCAAGGCGGCGCGCGAGTTTCGCTATCGGGTCGGCGTGAGCATGATCGGCGTGAACATCGGCGTGGCGGCCCCCATGGCTTTCTTGCATGGCCAGGATTCCGTAGAGTTCTACACGGACAAGAAAGTGGTCATTTCACGATGGTAG
PROTEIN sequence
Length: 451
MKTLRNYVGGEWLSPAANAYLDITNPATGEQLGRVPLSGTREVEQAVAAAQTAFLKWREVPPVVRARYLFKLKFLMEEQFEDLAATVTRENGKTLDEARGSVRRGIENVEHACGIPTLMVRQPLGVFAAITPFNFPAMVPCWFWPYAIATGNTFILKPSEQVPFSPTRLVELAHEAGIPPGVLNLVHGGKDAVNALLAHPGIAGISFVGSSPVAKHVYQEAAAHGKRVQALGGAKNHVVVMPDADMDRAVANVTESMFGCAGQRCLAGSVVVAAGKAYEPFRDKLLSAAKDLRLGYGLEPGVNMGPVISARHKEKVLSYVEAGRKDGATLLLDGRGTKVEKHPRGHFVGPTVFDGVQPDMTIGKEEIFGPVASVTHVSNLDEGIEMVQRSGFANATSIFTQSGKAAREFRYRVGVSMIGVNIGVAAPMAFLHGQDSVEFYTDKKVVISRW*