ggKbase home page

13_1_40cm_2_scaffold_2232_26

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 27414..27899

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 147.0
  • Bit_score: 149
  • Evalue 2.70e-33
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 160.0
  • Bit_score: 231
  • Evalue 1.00e-57
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 147.0
  • Bit_score: 149
  • Evalue 7.70e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGACGCTGAGCGGCGACATTCGGACCGGGGTCGCGCCCCGACGTGCGGTGAATGACGACGTGGCCCTGGCGGCCGCCGGGGACGGGTCTGCCTTCGAGCGGCTCTACCGCACGCACGTCGCGCGGATTCACAGTTTGACGCGCCGGATGCTCGGCAGCCACGAGGCCGACGAGGTCACGCAGGACATTTTCGTCCGCACCTGGCAGAAGCTGGGCCAGTTCCGCGGCGACTCGCAGTTCTCCACCTGGCTCCACCGGCTCGCGGTGAACGTCGTCATCGAGCGGCGGCGATCGTTTGCGATTCAGCGCGAGCGCATGTCGGATGACCCGTTGGCGCTCGACATGGTGACCGTCGCGCCGGCACGCGCCGACCTAACGGTGGATTTCGAGGCGGCGATCGAGCAGCTGCCGCCCGGCGCCCGCGAGATTTTCGTGCTCCACGACGTCGAGGGCTACAAGCATCGCGAGATTGCGGCGATGCTTTGA
PROTEIN sequence
Length: 162
MTLSGDIRTGVAPRRAVNDDVALAAAGDGSAFERLYRTHVARIHSLTRRMLGSHEADEVTQDIFVRTWQKLGQFRGDSQFSTWLHRLAVNVVIERRRSFAIQRERMSDDPLALDMVTVAPARADLTVDFEAAIEQLPPGAREIFVLHDVEGYKHREIAAML*