Alias: CARPRO_6
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARPRO_1_121
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
130334..130606
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=41)
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VKU3_9ACTO
|
|
CARPRO_1_122
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(130865..131350)
|
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=73 Tax=Propionibacterium RepID=D4HBB6_PROAS (db=UNIREF evalue=4.0e-80 bit_score=300.0 identity=87.58 coverage=98.7654320987654)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
|
|
CARPRO_1_123
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
131602..131901
|
131602..131901 + ( gc_cont=0.633)
Uncharacterized protein {ECO:0000313|EMBL:ERS68227.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
|
|
CARPRO_1_124
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(131812..132720)
|
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Propionibacterium acnes RepID=Q6A5R1_PROAC (db=UNIREF evalue=4.0e-97 bit_score=358.0 identity=61.84 coverage=99.3399339933993)
seg (db=Seg db_id=seg from=122 to=145)
|
|
CARPRO_1_125
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(132708..133361)
|
hypothetical protein
seg (db=Seg db_id=seg from=15 to=29)
Uncharacterized protein n=2 Tax=Propionibacterium avidum 44067 RepID=M9VG73_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS68229.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
|
|
CARPRO_1_126
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
133503..134504
|
Zn-binding dehydrogenase/oxidoreductase
rbh
Zn-binding dehydrogenase/oxidoreductase
rbh
NAD(P)H quinone oxidoreductase, PIG3 family n=4 Tax=Propionibacterium RepID=E4AFV9_PROAA (db=UNIREF evalue=4.0e-176 bit_score=620.0 identity=90.99 coverage=99.1017964071856)
|
|
CARPRO_1_127
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
135724..136254
|
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=73 Tax=Propionibacterium RepID=Q6A5Q8_PROAC (db=UNIREF evalue=4.0e-66 bit_score=253.0 identity=96.53 coverage=80.7909604519774)
seg (db=Seg db_id=seg from=145 to=170)
seg (db=Seg db_id=seg from=28 to=41)
|
|
CARPRO_1_128
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
136381..136845
|
seg (db=Seg db_id=seg from=18 to=56)
seg (db=Seg db_id=seg from=96 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=128)
|
|
CARPRO_1_129
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
137769..138221
|
transporter, major facilitator family protein
seg (db=Seg db_id=seg from=10 to=24)
seg (db=Seg db_id=seg from=35 to=47)
seg (db=Seg db_id=seg from=125 to=137)
|
|
CARPRO_1_130
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(138298..140445)
|
Na+/H+ antiporter
rbh
Na+/H+ antiporter
rbh
Transporter, CPA2 family n=73 Tax=Propionibacterium RepID=D4HBC2_PROAS (db=UNIREF evalue=0.0 bit_score=1128.0 identity=85.16 coverage=99.7206703910614)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=195)
|
|
CARPRO_1_131
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
140811..141377
|
transcription factor WhiB
seg (db=Seg db_id=seg from=35 to=54)
(db=HMMPfam db_id=PF02467 from=27 to=84 evalue=5.1e-06 interpro_id=IPR003482 interpro_description=Transcription factor WhiB)
(db=HMMPfam db_id=PF08281 from=130 to=149 evalue=3.6e-05 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
|
|
CARPRO_1_132
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
141434..142207
|
HAD superfamily hydrolase
HAD superfamily hydrolase
Hydrolase (HAD superfamily) n=69 Tax=Propionibacterium RepID=Q6A5Q4_PROAC (db=UNIREF evalue=5.0e-131 bit_score=470.0 identity=87.16 coverage=99.2248062015504)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=257 evalue=7.2e-49 interpro_id=IPR023214 interpro_description=HAD-like domain)
|
|
CARPRO_1_133
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(142260..143585)
|
hypothetical protein
hypothetical protein
Conserved protein n=18 Tax=Propionibacterium RepID=Q6A5P1_PROAC (db=UNIREF evalue=0.0 bit_score=812.0 identity=89.07 coverage=99.0950226244344)
HIT-like (db=superfamily db_id=SSF54197 from=6 to=266 evalue=2.3e-21 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
|
|
CARPRO_1_134
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(143582..144856)
|
seryl-tRNA ligase (EC:6.1.1.11)
seryl-tRNA ligase (EC:6.1.1.11)
Seryl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYS_PROAC (db=UNIREF evalue=0.0 bit_score=764.0 identity=94.34 coverage=99.5294117647059)
seg (db=Seg db_id=seg from=83 to=94)
|
|
CARPRO_1_135
unknown
|
Not on your lists |
145180..145959
|
seg (db=Seg db_id=seg from=25 to=49)
seg (db=Seg db_id=seg from=58 to=69)
seg (db=Seg db_id=seg from=84 to=98)
seg (db=Seg db_id=seg from=112 to=121)
|
|
CARPRO_1_136
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(146148..147077)
|
Prephenate dehydratase
Prephenate dehydratase
Prephenate dehydratase n=1 Tax=Propionibacterium humerusii P08 RepID=F3P1Z2_9ACTO (db=UNIREF evalue=3.0e-109 bit_score=399.0 identity=87.11 coverage=72.258064516129)
PREPHENATE_DEHYDR_3 (db=ProfileScan db_id=PS51171 from=1 to=179 evalue=0.0 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
|
|
CARPRO_1_137
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(147122..147853)
|
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=72 Tax=Propionibacterium RepID=D4HBE2_PROAS (db=UNIREF evalue=3.0e-98 bit_score=361.0 identity=83.4 coverage=98.3606557377049)
seg (db=Seg db_id=seg from=207 to=215)
|
|
CARPRO_1_138
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
148045..148995
|
hypothetical protein
hypothetical protein
Zn2+ ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY72_9ACTO (db=UNIREF evalue=2.0e-105 bit_score=386.0 identity=69.34 coverage=86.1198738170347)
seg (db=Seg db_id=seg from=98 to=109)
|
|
CARPRO_1_139
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
149052..149801
|
manganese transport system ATP-binding protein MntA
rbh
ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY73_9ACTO (db=UNIREF evalue=2.0e-81 bit_score=305.0 identity=58.16 coverage=95.2)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=9 to=249 evalue=8.7e-85)
METAL ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF31 from=9 to=249 evalue=8.7e-85)
|
|
CARPRO_1_140
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
149798..150739
|
ABC transporter
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY74_9ACTO (db=UNIREF evalue=2.0e-70 bit_score=269.0 identity=58.42 coverage=95.2229299363057)
ABC-3 (db=HMMPfam db_id=PF00950 from=23 to=289 evalue=6.40000000000004e-49 interpro_id=IPR001626 interpro_description=ABC-3 GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626))
SSF81345 (db=superfamily db_id=SSF81345 from=25 to=290 evalue=1.20000117458134e-18)
|
|
CARPRO_1_141
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
150741..151691
|
ABC transporter
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY75_9ACTO (db=UNIREF evalue=9.0e-86 bit_score=320.0 identity=56.79 coverage=90.2208201892744)
seg (db=Seg db_id=seg from=238 to=246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
|
|
CARPRO_1_142
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
152183..152959
|
siderophore-interacting protein
Siderophore-interacting FAD-binding domain protein n=15 Tax=Propionibacterium RepID=D1YD52_PROAA (db=UNIREF evalue=1.0e-104 bit_score=383.0 identity=77.99 coverage=99.2277992277992)
FAD_FR (db=ProfileScan db_id=PS51384 from=3 to=122 evalue=0.0 interpro_id=IPR017927 interpro_description=Ferredoxin reductase-type FAD-binding domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
G3DSA:3.40.50.80 (db=Gene3D db_id=G3DSA:3.40.50.80 from=120 to=255 evalue=3.3e-29)
|
|
CARPRO_1_143
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(153047..153901)
|
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=73 Tax=Propionibacterium RepID=UPPP_PROAC (db=UNIREF evalue=4.0e-128 bit_score=461.0 identity=91.9 coverage=99.2982456140351)
transmembrane_regions (db=TMHMM db_id=tmhmm from=149 to=171)
|
|
CARPRO_1_144
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(154176..154694)
|
ferritin-like protein
rbh
ferritin-like protein
rbh
Ferritin-like protein n=73 Tax=Propionibacterium RepID=D4HBE7_PROAS (db=UNIREF evalue=2.0e-85 bit_score=317.0 identity=91.18 coverage=97.6878612716763)
Ferritin-like (db=superfamily db_id=SSF47240 from=1 to=162 evalue=2.0e-46 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
|
|
CARPRO_1_145
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(154964..155563)
|
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY78324.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VG48_9ACTO
|
|
CARPRO_1_146
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
155769..157136
|
arabinose efflux permease family protein
rbh
arabinose efflux permease family protein
rbh
Arabinose efflux permease family protein n=1 Tax=Mycobacterium sp. Spyr1 RepID=E6TDH9_MYCSR (db=UNIREF evalue=2.0e-172 bit_score=609.0 identity=69.07 coverage=94.0789473684211)
transmembrane_regions (db=TMHMM db_id=tmhmm from=405 to=427)
|
|
CARPRO_1_147
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(157272..157721)
|
50S ribosomal protein L9
50S ribosomal protein L9 n=73 Tax=Propionibacterium RepID=RL9_PROAC (db=UNIREF evalue=2.0e-74 bit_score=281.0 identity=92.62 coverage=98.6666666666667)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
Ribosomal_L9 (db=HMMPanther db_id=PTHR21368 from=1 to=134 evalue=8.30001403791595e-43 interpro_id=IPR000244 interpro_description=Ribosomal protein L9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
|
|
CARPRO_1_148
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(157736..157975)
|
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 n=73 Tax=Propionibacterium RepID=RS18_PROAC (db=UNIREF evalue=4.0e-28 bit_score=127.0 identity=98.73 coverage=97.5)
Ribosomal_S18 (db=BlastProDom db_id=PD002239 from=25 to=74 evalue=0.0 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL_S18 (db=PatternScan db_id=PS00057 from=25 to=48 evalue=0.0 interpro_id=IPR018275 interpro_description=Ribosomal protein S18, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
|
|
CARPRO_1_149
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(158121..158675)
|
ssDNA-binding protein
Single-stranded DNA-binding protein n=71 Tax=Propionibacterium RepID=D4HBF2_PROAS (db=UNIREF evalue=5.0e-68 bit_score=260.0 identity=93.48 coverage=98.9189189189189)
seg (db=Seg db_id=seg from=120 to=163)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=184 evalue=2.4e-46 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
|
|
CARPRO_1_150
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(158790..159080)
|
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 n=73 Tax=Propionibacterium RepID=RS6_PROAC (db=UNIREF evalue=2.0e-47 bit_score=191.0 identity=95.83 coverage=97.9381443298969)
Transl_elong_EF1B/rib_con (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=94 evalue=1.6e-35 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=92 evalue=7.29999999999999e-32 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
|