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CARPRO_1

Alias: CARPRO_6

Search features with annotation key words

Displaying items 121-150 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_1_121
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

130334..130606
DNA (273bp) protein (91aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=41)
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VKU3_9ACTO
CARPRO_1_122
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(130865..131350)
DNA (486bp) protein (162aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=73 Tax=Propionibacterium RepID=D4HBB6_PROAS (db=UNIREF evalue=4.0e-80 bit_score=300.0 identity=87.58 coverage=98.7654320987654)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
CARPRO_1_123
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

131602..131901
DNA (300bp) protein (100aa)
131602..131901 + ( gc_cont=0.633)
Uncharacterized protein {ECO:0000313|EMBL:ERS68227.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_1_124
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131812..132720)
DNA (909bp) protein (303aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Propionibacterium acnes RepID=Q6A5R1_PROAC (db=UNIREF evalue=4.0e-97 bit_score=358.0 identity=61.84 coverage=99.3399339933993)
seg (db=Seg db_id=seg from=122 to=145)
CARPRO_1_125
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132708..133361)
DNA (654bp) protein (218aa)
hypothetical protein
seg (db=Seg db_id=seg from=15 to=29)
Uncharacterized protein n=2 Tax=Propionibacterium avidum 44067 RepID=M9VG73_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS68229.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_1_126
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

133503..134504
DNA (1002bp) protein (334aa)
Zn-binding dehydrogenase/oxidoreductase rbh
Zn-binding dehydrogenase/oxidoreductase rbh
NAD(P)H quinone oxidoreductase, PIG3 family n=4 Tax=Propionibacterium RepID=E4AFV9_PROAA (db=UNIREF evalue=4.0e-176 bit_score=620.0 identity=90.99 coverage=99.1017964071856)
quinone_pig3: putative NAD(P)H quinone o (db=HMMTigr db_id=TIGR02824 from=17 to=333 evalue=7.4e-145 interpro_id=IPR014189 interpro_description=Quinone oxidoreductase putative, PIG3)
CARPRO_1_127
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

135724..136254
DNA (531bp) protein (177aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=73 Tax=Propionibacterium RepID=Q6A5Q8_PROAC (db=UNIREF evalue=4.0e-66 bit_score=253.0 identity=96.53 coverage=80.7909604519774)
seg (db=Seg db_id=seg from=145 to=170)
seg (db=Seg db_id=seg from=28 to=41)
CARPRO_1_128
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136381..136845
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=18 to=56)
seg (db=Seg db_id=seg from=96 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=128)
CARPRO_1_129
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137769..138221
DNA (453bp) protein (151aa)
transporter, major facilitator family protein
seg (db=Seg db_id=seg from=10 to=24)
seg (db=Seg db_id=seg from=35 to=47)
seg (db=Seg db_id=seg from=125 to=137)
CARPRO_1_130
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138298..140445)
DNA (2148bp) protein (716aa)
Na+/H+ antiporter rbh
Na+/H+ antiporter rbh
Transporter, CPA2 family n=73 Tax=Propionibacterium RepID=D4HBC2_PROAS (db=UNIREF evalue=0.0 bit_score=1128.0 identity=85.16 coverage=99.7206703910614)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=195)
CARPRO_1_131
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

140811..141377
DNA (567bp) protein (189aa)
transcription factor WhiB
seg (db=Seg db_id=seg from=35 to=54)
(db=HMMPfam db_id=PF02467 from=27 to=84 evalue=5.1e-06 interpro_id=IPR003482 interpro_description=Transcription factor WhiB)
(db=HMMPfam db_id=PF08281 from=130 to=149 evalue=3.6e-05 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
CARPRO_1_132
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

141434..142207
DNA (774bp) protein (258aa)
HAD superfamily hydrolase
HAD superfamily hydrolase
Hydrolase (HAD superfamily) n=69 Tax=Propionibacterium RepID=Q6A5Q4_PROAC (db=UNIREF evalue=5.0e-131 bit_score=470.0 identity=87.16 coverage=99.2248062015504)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=257 evalue=7.2e-49 interpro_id=IPR023214 interpro_description=HAD-like domain)
CARPRO_1_133
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142260..143585)
DNA (1326bp) protein (442aa)
hypothetical protein
hypothetical protein
Conserved protein n=18 Tax=Propionibacterium RepID=Q6A5P1_PROAC (db=UNIREF evalue=0.0 bit_score=812.0 identity=89.07 coverage=99.0950226244344)
HIT-like (db=superfamily db_id=SSF54197 from=6 to=266 evalue=2.3e-21 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
CARPRO_1_134
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(143582..144856)
DNA (1275bp) protein (425aa)
seryl-tRNA ligase (EC:6.1.1.11)
seryl-tRNA ligase (EC:6.1.1.11)
Seryl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYS_PROAC (db=UNIREF evalue=0.0 bit_score=764.0 identity=94.34 coverage=99.5294117647059)
seg (db=Seg db_id=seg from=83 to=94)
CARPRO_1_135
unknown

Not on your lists

145180..145959
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=25 to=49)
seg (db=Seg db_id=seg from=58 to=69)
seg (db=Seg db_id=seg from=84 to=98)
seg (db=Seg db_id=seg from=112 to=121)
CARPRO_1_136
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146148..147077)
DNA (930bp) protein (310aa)
Prephenate dehydratase
Prephenate dehydratase
Prephenate dehydratase n=1 Tax=Propionibacterium humerusii P08 RepID=F3P1Z2_9ACTO (db=UNIREF evalue=3.0e-109 bit_score=399.0 identity=87.11 coverage=72.258064516129)
PREPHENATE_DEHYDR_3 (db=ProfileScan db_id=PS51171 from=1 to=179 evalue=0.0 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
CARPRO_1_137
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147122..147853)
DNA (732bp) protein (244aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=72 Tax=Propionibacterium RepID=D4HBE2_PROAS (db=UNIREF evalue=3.0e-98 bit_score=361.0 identity=83.4 coverage=98.3606557377049)
seg (db=Seg db_id=seg from=207 to=215)
CARPRO_1_138
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

148045..148995
DNA (951bp) protein (317aa)
hypothetical protein
hypothetical protein
Zn2+ ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY72_9ACTO (db=UNIREF evalue=2.0e-105 bit_score=386.0 identity=69.34 coverage=86.1198738170347)
seg (db=Seg db_id=seg from=98 to=109)
CARPRO_1_139
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149052..149801
DNA (750bp) protein (250aa)
manganese transport system ATP-binding protein MntA rbh
ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY73_9ACTO (db=UNIREF evalue=2.0e-81 bit_score=305.0 identity=58.16 coverage=95.2)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=9 to=249 evalue=8.7e-85)
METAL ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF31 from=9 to=249 evalue=8.7e-85)
CARPRO_1_140
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149798..150739
DNA (942bp) protein (314aa)
ABC transporter
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY74_9ACTO (db=UNIREF evalue=2.0e-70 bit_score=269.0 identity=58.42 coverage=95.2229299363057)
ABC-3 (db=HMMPfam db_id=PF00950 from=23 to=289 evalue=6.40000000000004e-49 interpro_id=IPR001626 interpro_description=ABC-3 GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626))
SSF81345 (db=superfamily db_id=SSF81345 from=25 to=290 evalue=1.20000117458134e-18)
CARPRO_1_141
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150741..151691
DNA (951bp) protein (317aa)
ABC transporter
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY75_9ACTO (db=UNIREF evalue=9.0e-86 bit_score=320.0 identity=56.79 coverage=90.2208201892744)
seg (db=Seg db_id=seg from=238 to=246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
CARPRO_1_142
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152183..152959
DNA (777bp) protein (259aa)
siderophore-interacting protein
Siderophore-interacting FAD-binding domain protein n=15 Tax=Propionibacterium RepID=D1YD52_PROAA (db=UNIREF evalue=1.0e-104 bit_score=383.0 identity=77.99 coverage=99.2277992277992)
FAD_FR (db=ProfileScan db_id=PS51384 from=3 to=122 evalue=0.0 interpro_id=IPR017927 interpro_description=Ferredoxin reductase-type FAD-binding domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
G3DSA:3.40.50.80 (db=Gene3D db_id=G3DSA:3.40.50.80 from=120 to=255 evalue=3.3e-29)
CARPRO_1_143
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153047..153901)
DNA (855bp) protein (285aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=73 Tax=Propionibacterium RepID=UPPP_PROAC (db=UNIREF evalue=4.0e-128 bit_score=461.0 identity=91.9 coverage=99.2982456140351)
transmembrane_regions (db=TMHMM db_id=tmhmm from=149 to=171)
CARPRO_1_144
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154176..154694)
DNA (519bp) protein (173aa)
ferritin-like protein rbh
ferritin-like protein rbh
Ferritin-like protein n=73 Tax=Propionibacterium RepID=D4HBE7_PROAS (db=UNIREF evalue=2.0e-85 bit_score=317.0 identity=91.18 coverage=97.6878612716763)
Ferritin-like (db=superfamily db_id=SSF47240 from=1 to=162 evalue=2.0e-46 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
CARPRO_1_145
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154964..155563)
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY78324.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VG48_9ACTO
CARPRO_1_146
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155769..157136
DNA (1368bp) protein (456aa)
arabinose efflux permease family protein rbh
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein n=1 Tax=Mycobacterium sp. Spyr1 RepID=E6TDH9_MYCSR (db=UNIREF evalue=2.0e-172 bit_score=609.0 identity=69.07 coverage=94.0789473684211)
transmembrane_regions (db=TMHMM db_id=tmhmm from=405 to=427)
CARPRO_1_147
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(157272..157721)
DNA (450bp) protein (150aa)
50S ribosomal protein L9
50S ribosomal protein L9 n=73 Tax=Propionibacterium RepID=RL9_PROAC (db=UNIREF evalue=2.0e-74 bit_score=281.0 identity=92.62 coverage=98.6666666666667)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
Ribosomal_L9 (db=HMMPanther db_id=PTHR21368 from=1 to=134 evalue=8.30001403791595e-43 interpro_id=IPR000244 interpro_description=Ribosomal protein L9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
CARPRO_1_148
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(157736..157975)
DNA (240bp) protein (80aa)
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 n=73 Tax=Propionibacterium RepID=RS18_PROAC (db=UNIREF evalue=4.0e-28 bit_score=127.0 identity=98.73 coverage=97.5)
Ribosomal_S18 (db=BlastProDom db_id=PD002239 from=25 to=74 evalue=0.0 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL_S18 (db=PatternScan db_id=PS00057 from=25 to=48 evalue=0.0 interpro_id=IPR018275 interpro_description=Ribosomal protein S18, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
CARPRO_1_149
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158121..158675)
DNA (555bp) protein (185aa)
ssDNA-binding protein
Single-stranded DNA-binding protein n=71 Tax=Propionibacterium RepID=D4HBF2_PROAS (db=UNIREF evalue=5.0e-68 bit_score=260.0 identity=93.48 coverage=98.9189189189189)
seg (db=Seg db_id=seg from=120 to=163)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=184 evalue=2.4e-46 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
CARPRO_1_150
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(158790..159080)
DNA (291bp) protein (97aa)
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 n=73 Tax=Propionibacterium RepID=RS6_PROAC (db=UNIREF evalue=2.0e-47 bit_score=191.0 identity=95.83 coverage=97.9381443298969)
Transl_elong_EF1B/rib_con (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=94 evalue=1.6e-35 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=92 evalue=7.29999999999999e-32 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Displaying items 121-150 of 234 in total

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