ggKbase home page

CARPRO_1

Alias: CARPRO_6

Search features with annotation key words

Displaying items 181-210 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_1_181
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

195509..196681
DNA (1173bp) protein (391aa)
putative DNA repair exonuclease or phosphoesterase rbh
putative DNA repair exonuclease or phosphoesterase rbh
Ser/Thr protein phosphatase family protein n=69 Tax=Propionibacterium RepID=E4A7W0_PROAA (db=UNIREF evalue=0.0 bit_score=649.0 identity=82.23 coverage=99.4884910485933)
seg (db=Seg db_id=seg from=335 to=344)
CARPRO_1_182
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

196678..199287
DNA (2610bp) protein (870aa)
RecF/RecN/SMC N-terminal domain protein rbh
RecF/RecN/SMC N-terminal domain protein rbh
RecF/RecN/SMC N-terminal domain protein n=69 Tax=Propionibacterium RepID=D4HBI2_PROAS (db=UNIREF evalue=0.0 bit_score=980.0 identity=66.28 coverage=99.6551724137931)
coiled-coil (db=Coil db_id=coil from=702 to=723 evalue=NA)
CARPRO_1_183
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(199359..200705)
DNA (1347bp) protein (449aa)
hypothetical protein
hypothetical protein
MATE efflux family protein n=72 Tax=Propionibacterium RepID=D4HBI3_PROAS (db=UNIREF evalue=0.0 bit_score=640.0 identity=87.05 coverage=99.554565701559)
PTHR11206:SF17 (db=HMMPanther db_id=PTHR11206:SF17 from=16 to=401 evalue=3.79997359309399e-109)
CARPRO_1_184
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(200705..201352)
DNA (648bp) protein (216aa)
TetR family transcriptional regulator
TetR family transcriptional regulator
Transcriptional regulator, TetR family n=4 Tax=Propionibacterium RepID=E4AG32_PROAA (db=UNIREF evalue=1.0e-88 bit_score=329.0 identity=82.33 coverage=99.0740740740741)
HTH_TETR_2 (db=ProfileScan db_id=PS50977 from=17 to=77 evalue=0.0 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677))
CARPRO_1_185
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

201491..202363
DNA (873bp) protein (291aa)
aminotransferase, class IV rbh
aminotransferase, class IV rbh
Aminotransferase, class IV n=73 Tax=Propionibacterium RepID=D4HBI5_PROAS (db=UNIREF evalue=4.0e-134 bit_score=481.0 identity=84.48 coverage=99.3127147766323)
seg (db=Seg db_id=seg from=26 to=36)
CARPRO_1_186
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202363..202851
DNA (489bp) protein (163aa)
ybaK/ebsC protein
YbaK/ebsC protein n=69 Tax=Propionibacterium RepID=D4HBI6_PROAS (db=UNIREF evalue=2.0e-57 bit_score=224.0 identity=87.04 coverage=98.7730061349693)
YbaK/aa-tRNA-synth-assoc-reg (db=Gene3D db_id=G3DSA:3.90.960.10 from=5 to=161 evalue=3.60000000000002e-57 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
YbaK_EbsC (db=HMMTigr db_id=TIGR00011 from=9 to=161 evalue=4.39999999999997e-51 interpro_id=IPR004369 interpro_description=Prolyl-tRNA editing protein, YbaK/EbsC GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARPRO_1_187
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(202864..203259)
DNA (396bp) protein (132aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
CARPRO_1_188
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(203256..203831)
DNA (576bp) protein (192aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=146)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
CARPRO_1_189
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(203828..204619)
DNA (792bp) protein (264aa)
membrane protein rbh
membrane protein rbh
ErfK/YbiS/YcfS/YnhG n=1 Tax=Propionibacterium humerusii P08 RepID=F3P252_9ACTO (db=UNIREF evalue=1.0e-103 bit_score=379.0 identity=78.85 coverage=97.3484848484848)
seg (db=Seg db_id=seg from=25 to=36)
CARPRO_1_190
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

204748..205653
DNA (906bp) protein (302aa)
PfkB domain-containing protein rbh
PFKB_KINASES_1 (db=PatternScan db_id=PS00583 from=26 to=50 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site GO=Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=294 evalue=1.7e-50)
no description (db=Gene3D db_id=G3DSA:3.40.1190.20 from=3 to=292 evalue=3.1e-45)
CARPRO_1_191
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

205693..207762
DNA (2070bp) protein (690aa)
nadE; NAD synthetase (EC:6.3.5.1) rbh
nadE; NAD synthetase (EC:6.3.5.1) rbh
NAD+ synthetase n=73 Tax=Propionibacterium RepID=D4HBJ0_PROAS (db=UNIREF evalue=0.0 bit_score=1278.0 identity=92.58 coverage=99.4202898550725)
seg (db=Seg db_id=seg from=110 to=121)
CARPRO_1_192
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

207922..210186
DNA (2265bp) protein (755aa)
6-phosphofructokinase
6-phosphofructokinase
6-phosphofructokinase n=73 Tax=Propionibacterium RepID=D4HBJ1_PROAS (db=UNIREF evalue=0.0 bit_score=1333.0 identity=93.1 coverage=99.7350993377484)
seg (db=Seg db_id=seg from=459 to=475)
CARPRO_1_193
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

210515..210946
DNA (432bp) protein (144aa)
hypothetical protein
seg (db=Seg db_id=seg from=41 to=46)
BB1717-like (db=superfamily db_id=SSF143081 from=1 to=134 evalue=2.8e-27)
(db=HMMPfam db_id=PF02586 from=1 to=129 evalue=1.0e-23 interpro_id=IPR003738 interpro_description=Protein of unknown function DUF159)
CARPRO_1_194
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(210978..211718)
DNA (741bp) protein (247aa)
seg (db=Seg db_id=seg from=28 to=44)
seg (db=Seg db_id=seg from=176 to=193)
Prokaryotic lipoproteins and lipoprotein localization factors (db=superfamily db_id=SSF89392 from=50 to=243 evalue=1.2e-10)
(db=HMMPfam db_id=PF07161 from=56 to=242 evalue=2.7e-05 interpro_id=IPR009830 interpro_description=Protein of unknown function DUF1396, LppX/LprAFG lipoprotein)
CARPRO_1_195
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(211831..212589)
DNA (759bp) protein (253aa)
seg (db=Seg db_id=seg from=11 to=20)
seg (db=Seg db_id=seg from=40 to=55)
Prokaryotic lipoproteins and lipoprotein localization factors (db=superfamily db_id=SSF89392 from=63 to=249 evalue=6.2e-06)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=27 evalue=5.0)
CARPRO_1_196
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(212715..212840)
DNA (126bp) protein (42aa)
212715..212840 - ( gc_cont=0.651)
Uncharacterized protein {ECO:0000313|EMBL:ERS23163.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_1_197
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

213076..214302
DNA (1227bp) protein (409aa)
putative secreted lipoprotein
putative secreted lipoprotein
ErfK/YbiS/YcfS/YnhG n=69 Tax=Propionibacterium RepID=D4HBJ6_PROAS (db=UNIREF evalue=2.0e-158 bit_score=562.0 identity=74.51 coverage=98.2885085574572)
seg (db=Seg db_id=seg from=34 to=63)
CARPRO_1_198
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

214572..215774
DNA (1203bp) protein (401aa)
lipoprotein A family protein
lipoprotein A family protein
Bacterial SH3 domain protein n=29 Tax=Propionibacterium RepID=E4BRR3_PROAA (db=UNIREF evalue=6.0e-169 bit_score=597.0 identity=79.45 coverage=99.002493765586)
seg (db=Seg db_id=seg from=23 to=36)
CARPRO_1_199
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

216079..217365
DNA (1287bp) protein (429aa)
Citrate synthase n=73 Tax=Propionibacterium RepID=D4HBJ8_PROAS (db=UNIREF evalue=0.0 bit_score=859.0 identity=94.86 coverage=99.5337995337995)
citrate (Si)-synthase
citrate (Si)-synthase
CITRATE_SYNTHASE (db=PatternScan db_id=PS00480 from=302 to=314 evalue=0.0 interpro_id=IPR019810 interpro_description=Citrate synthase active site GO=Biological Process: tricarboxylic acid cycle (GO:0006099), Molecular Function: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer (GO:0046912))
CARPRO_1_200
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

217653..218678
DNA (1026bp) protein (342aa)
adenosine deaminase rbh
adenosine deaminase rbh
Adenosine deaminase n=4 Tax=Propionibacterium RepID=E4AGN4_PROAA (db=UNIREF evalue=2.0e-158 bit_score=561.0 identity=81.76 coverage=99.1228070175439)
seg (db=Seg db_id=seg from=108 to=120)
CARPRO_1_201
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218745..219857)
DNA (1113bp) protein (371aa)
alanine dehydrogenase rbh
alanine dehydrogenase rbh
Alanine dehydrogenase (Fragment) n=3 Tax=Propionibacterium acnes RepID=E4BH80_PROAA (db=UNIREF evalue=1.0e-153 bit_score=546.0 identity=81.35 coverage=99.4609164420485)
seg (db=Seg db_id=seg from=154 to=173)
CARPRO_1_202
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(220031..221068)
DNA (1038bp) protein (346aa)
AsnC family transcriptional regulator rbh
AsnC family transcriptional regulator rbh
Transcriptional regulator, AsnC family n=51 Tax=Propionibacterium RepID=D4HBK1_PROAS (db=UNIREF evalue=9.0e-176 bit_score=620.0 identity=90.18 coverage=96.5317919075144)
Dimeric alpha+beta barrel (db=superfamily db_id=SSF54909 from=67 to=153 evalue=1.3e-14 interpro_id=IPR011008 interpro_description=Dimeric alpha-beta barrel)
CARPRO_1_203
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(221238..221642)
DNA (405bp) protein (135aa)
seg (db=Seg db_id=seg from=49 to=70)
seg (db=Seg db_id=seg from=10 to=41)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS68307.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_1_204
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

221659..222180
DNA (522bp) protein (174aa)
dihydrodipicolinate reductase
dihydrodipicolinate reductase
Dihydrodipicolinate reductase n=73 Tax=Propionibacterium RepID=D4HBK2_PROAS (db=UNIREF evalue=1.0e-83 bit_score=311.0 identity=96.25 coverage=91.3793103448276)
seg (db=Seg db_id=seg from=4 to=13)
CARPRO_1_205
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

222329..222538
DNA (210bp) protein (70aa)
hypothetical protein
Putative uncharacterized protein n=61 Tax=Propionibacterium RepID=D4HBK3_PROAS (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=85.51 coverage=97.1428571428571)
Uncharacterized protein {ECO:0000313|EMBL:EPH00696.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HG
CARPRO_1_206
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

222535..223950
DNA (1416bp) protein (472aa)
threonine synthase / cystathionine beta-synthase rbh
threonine synthase / cystathionine beta-synthase rbh
2-amino-4-ketopentanoate thiolase, beta subunit n=73 Tax=Propionibacterium RepID=D4HBK4_PROAS (db=UNIREF evalue=0.0 bit_score=856.0 identity=92.29 coverage=98.728813559322)
seg (db=Seg db_id=seg from=230 to=245)
CARPRO_1_207
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

223950..224423
DNA (474bp) protein (158aa)
hypothetical protein rbh
seg (db=Seg db_id=seg from=7 to=30)
seg (db=Seg db_id=seg from=78 to=89)
Cobalamin (vitamin B12)-dependent enzymes (db=superfamily db_id=SSF51703 from=17 to=118 evalue=6.7e-13 interpro_id=IPR016176 interpro_description=Cobalamin (vitamin B12)-dependent enzyme, catalytic GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: cobalamin binding (GO:0031419))
CARPRO_1_208
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

224423..225205
DNA (783bp) protein (261aa)
D-serine/D-alanine/glycine transporter rbh
D-serine/D-alanine/glycine transporter rbh
D-serine/D-alanine/glycine transporter n=73 Tax=Propionibacterium RepID=Q6A5H4_PROAC (db=UNIREF evalue=1.0e-112 bit_score=409.0 identity=90.77 coverage=99.2337164750958)
seg (db=Seg db_id=seg from=72 to=87)
CARPRO_1_209
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

225672..227051
DNA (1380bp) protein (460aa)
D-serine/D-alanine/glycine transporter rbh
D-serine/D-alanine/glycine transporter rbh
Amino acid permease n=4 Tax=Propionibacterium RepID=E4AG55_PROAA (db=UNIREF evalue=2.0e-168 bit_score=596.0 identity=89.04 coverage=98.9130434782609)
transmembrane_regions (db=TMHMM db_id=tmhmm from=236 to=258)
CARPRO_1_210
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

227312..228439
DNA (1128bp) protein (376aa)
alr; alanine racemase (EC:5.1.1.1) rbh
alr; alanine racemase (EC:5.1.1.1) rbh
Alanine racemase n=69 Tax=Propionibacterium RepID=ALR_PROAC (db=UNIREF evalue=0.0 bit_score=659.0 identity=86.67 coverage=99.468085106383)
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=36 to=45 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
Displaying items 181-210 of 234 in total

View Taxonomy