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CARPRO_11

Alias: CARPRO_17

Search features with annotation key words

Displaying items 31-60 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_11_31
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37516..37728
DNA (213bp) protein (71aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9VI01_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS24307.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_32
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37757..38269)
DNA (513bp) protein (171aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65747.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=89 Tax=Propionibacterium RepID=I4IZG0_PROAA
CARPRO_11_33
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38276..38887)
DNA (612bp) protein (204aa)
hypothetical protein
hypothetical protein
Amino acid-binding ACT domain protein n=9 Tax=Propionibacterium RepID=F3P0S4_9ACTO (db=UNIREF evalue=3.0e-94 bit_score=347.0 identity=90.15 coverage=99.0196078431373)
seg (db=Seg db_id=seg from=45 to=57)
CARPRO_11_34
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39016..39375
DNA (360bp) protein (120aa)
glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=73 Tax=Propionibacterium RepID=Q6A8P6_PROAC (db=UNIREF evalue=1.0e-37 bit_score=158.0 identity=93.46 coverage=88.3333333333333)
seg (db=Seg db_id=seg from=52 to=69)
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=22 to=113 evalue=8.9e-29)
CARPRO_11_35
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39372..40877
DNA (1506bp) protein (502aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A n=73 Tax=Propionibacterium RepID=GATA_PROAC (db=UNIREF evalue=0.0 bit_score=873.0 identity=90.6 coverage=99.402390438247)
seg (db=Seg db_id=seg from=153 to=165)
CARPRO_11_36
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40874..42370
DNA (1497bp) protein (499aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-) rbh
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-) rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=72 Tax=Propionibacterium RepID=GATB_PROAC (db=UNIREF evalue=0.0 bit_score=924.0 identity=92.96 coverage=99.3987975951904)
seg (db=Seg db_id=seg from=435 to=453)
CARPRO_11_37
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42402..43037)
DNA (636bp) protein (212aa)
hypothetical protein rbh
hypothetical protein rbh
Conserved protein n=73 Tax=Propionibacterium RepID=Q6A8P3_PROAC (db=UNIREF evalue=2.0e-102 bit_score=374.0 identity=85.31 coverage=99.0566037735849)
TIGR03085: conserved hypothetical protein T (db=HMMTigr db_id=TIGR03085 from=4 to=205 evalue=2.9e-105 interpro_id=IPR017519 interpro_description=Conserved hypothetical protein CHP03085)
CARPRO_11_38
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43119..43499
DNA (381bp) protein (127aa)
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=69 Tax=Propionibacterium RepID=HIS3_PROAC (db=UNIREF evalue=3.0e-49 bit_score=197.0 identity=90.91 coverage=94.488188976378)
seg (db=Seg db_id=seg from=51 to=62)
HisI-like (db=superfamily db_id=SSF141734 from=13 to=124 evalue=4.2e-41)
CARPRO_11_39
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43499..44998
DNA (1500bp) protein (500aa)
anthranilate synthase component I (EC:4.1.3.27) rbh
anthranilate synthase component I (EC:4.1.3.27) rbh
Anthranilate synthase component I n=1 Tax=Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 RepID=D7GDV2_PROFC (db=UNIREF evalue=4.0e-147 bit_score=525.0 identity=59.79 coverage=94.6)
seg (db=Seg db_id=seg from=134 to=147)
CARPRO_11_40
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44995..45627
DNA (633bp) protein (211aa)
hypothetical protein
Tryptophan-associated transmembrane protein n=67 Tax=Propionibacterium RepID=F1TP45_PROAA (db=UNIREF evalue=5.0e-62 bit_score=240.0 identity=64.53 coverage=90.9952606635071)
seg (db=Seg db_id=seg from=76 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
CARPRO_11_41
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45605..45760
DNA (156bp) protein (52aa)
45605..45760 + ( gc_cont=0.628)
Uncharacterized protein {ECO:0000313|EMBL:ERS24317.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_42
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45778..45993
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS24318.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=85 Tax=Propionibacterium RepID=K0HK66_PROAA
CARPRO_11_43
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45994..46794
DNA (801bp) protein (267aa)
indole-3-glycerol phosphate synthase rbh
indole-3-glycerol phosphate synthase rbh
Indole-3-glycerol phosphate synthase n=4 Tax=Propionibacterium RepID=E4ABY2_PROAA (db=UNIREF evalue=3.0e-119 bit_score=431.0 identity=85.71 coverage=99.250936329588)
seg (db=Seg db_id=seg from=178 to=187)
CARPRO_11_44
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46826..48082
DNA (1257bp) protein (419aa)
tryptophan synthase subunit beta (EC:4.2.1.20) rbh
tryptophan synthase subunit beta (EC:4.2.1.20) rbh
Tryptophan synthase beta chain n=73 Tax=Propionibacterium RepID=D4HDT9_PROAS (db=UNIREF evalue=0.0 bit_score=749.0 identity=89.71 coverage=99.5226730310263)
seg (db=Seg db_id=seg from=126 to=138)
CARPRO_11_45
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48079..48912
DNA (834bp) protein (278aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=4 Tax=Propionibacterium RepID=E4ABY0_PROAA (db=UNIREF evalue=1.0e-135 bit_score=486.0 identity=88.69 coverage=98.2014388489209)
TRP_SYNTHASE_ALPHA (db=PatternScan db_id=PS00167 from=52 to=65 evalue=0.0 interpro_id=IPR018204 interpro_description=Tryptophan synthase, alpha chain, active site GO=Molecular Function: tryptophan synthase activity (GO:0004834))
CARPRO_11_46
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48909..49748
DNA (840bp) protein (280aa)
prolipoprotein diacylglyceryl transferase rbh
prolipoprotein diacylglyceryl transferase rbh
Prolipoprotein diacylglyceryl transferase n=69 Tax=Propionibacterium RepID=LGT_PROAC (db=UNIREF evalue=1.0e-118 bit_score=429.0 identity=86.38 coverage=99.2857142857143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=261)
CARPRO_11_47
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49875..54398
DNA (4524bp) protein (1508aa)
NADH-dependent glutamate synthase large subunit rbh
NADH-dependent glutamate synthase large subunit rbh
Glutamate synthase [NADPH], large chain n=74 Tax=Propionibacterium RepID=D4HDU2_PROAS (db=UNIREF evalue=0.0 bit_score=2735.0 identity=92.17 coverage=99.7347480106101)
seg (db=Seg db_id=seg from=1478 to=1489)
CARPRO_11_48
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54391..55863
DNA (1473bp) protein (491aa)
glutamate synthase, small subunit rbh
glutamate synthase, small subunit rbh
Glutamate synthase, small subunit n=73 Tax=Propionibacterium RepID=D4HDU3_PROAS (db=UNIREF evalue=0.0 bit_score=916.0 identity=93.06 coverage=99.5926680244399)
seg (db=Seg db_id=seg from=12 to=23)
CARPRO_11_49
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55927..56229
DNA (303bp) protein (101aa)
hypothetical protein
seg (db=Seg db_id=seg from=46 to=62)
seg (db=Seg db_id=seg from=21 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
CARPRO_11_50
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56239..56436
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=17 to=32)
TAT (db=ProfileScan db_id=PS51318 from=1 to=32 evalue=7.803 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65765.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_51
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56544..57203)
DNA (660bp) protein (220aa)
hypothetical protein rbh
seg (db=Seg db_id=seg from=22 to=33)
seg (db=Seg db_id=seg from=77 to=89)
seg (db=Seg db_id=seg from=97 to=113)
CARPRO_11_52
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57226..58089)
DNA (864bp) protein (288aa)
transcriptional regulator rbh
transcriptional regulator rbh
Transcriptional regulator, RpiR family n=69 Tax=Propionibacterium RepID=D4HDU7_PROAS (db=UNIREF evalue=8.0e-130 bit_score=466.0 identity=83.92 coverage=98.9583333333333)
seg (db=Seg db_id=seg from=19 to=30)
CARPRO_11_53
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58557..59318
DNA (762bp) protein (254aa)
N-acetylmuramic acid 6-phosphate etherase rbh
N-acetylmuramic acid 6-phosphate etherase n=58 Tax=Propionibacterium RepID=D4HDU8_PROAS (db=UNIREF evalue=3.0e-72 bit_score=275.0 identity=78.65 coverage=68.1102362204724)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=1 to=157 evalue=1.1e-47)
SIS domain (db=superfamily db_id=SSF53697 from=1 to=157 evalue=1.1e-35)
CARPRO_11_54
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59357..60367
DNA (1011bp) protein (337aa)
Tat (twin-arginine translocation) pathway signal sequence rbh
Tat (twin-arginine translocation) pathway signal sequence rbh
Tat pathway signal sequence n=4 Tax=Propionibacterium RepID=E4ABW8_PROAA (db=UNIREF evalue=7.0e-134 bit_score=480.0 identity=71.04 coverage=99.1097922848665)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
CARPRO_11_55
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60485..61048
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=94 to=111)
Uncharacterized protein {ECO:0000313|EMBL:ERS65770.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_56
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61063..61206)
DNA (144bp) protein (48aa)
61063..61206 - ( gc_cont=0.465)
Uncharacterized protein {ECO:0000313|EMBL:ERS65771.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_57
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61682..61972
DNA (291bp) protein (97aa)
61682..61972 + ( gc_cont=0.605)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65772.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_58
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62077..65649
DNA (3573bp) protein (1191aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7) rbh
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7) rbh
DNA polymerase III alpha subunit n=73 Tax=Propionibacterium RepID=Q6A8L7_PROAC (db=UNIREF evalue=0.0 bit_score=2314.0 identity=95.71 coverage=99.7481108312343)
seg (db=Seg db_id=seg from=428 to=439)
CARPRO_11_59
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65646..66200
DNA (555bp) protein (185aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
CARPRO_11_60
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66205..67524
DNA (1320bp) protein (440aa)
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=73 Tax=Propionibacterium RepID=HISX_PROAC (db=UNIREF evalue=0.0 bit_score=741.0 identity=90.66 coverage=99.5454545454545)
seg (db=Seg db_id=seg from=343 to=357)
Displaying items 31-60 of 292 in total

View Taxonomy