ggKbase home page

CARPRO_11

Alias: CARPRO_17

Search features with annotation key words

Displaying items 61-90 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_11_61
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67521..68684
DNA (1164bp) protein (388aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
Histidinol-phosphate aminotransferase n=73 Tax=Propionibacterium RepID=HIS8_PROAC (db=UNIREF evalue=9.0e-177 bit_score=623.0 identity=89.33 coverage=96.3917525773196)
seg (db=Seg db_id=seg from=179 to=190)
CARPRO_11_62
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


68684..69304
DNA (621bp) protein (207aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=73 Tax=Propionibacterium RepID=HIS7_PROAC (db=UNIREF evalue=1.0e-102 bit_score=375.0 identity=87.38 coverage=99.0338164251208)
IGP_DEHYDRATASE_1 (db=PatternScan db_id=PS00954 from=63 to=76 evalue=0.0 interpro_id=IPR020565 interpro_description=Imidazoleglycerol-phosphate dehydratase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate dehydratase activity (GO:0004424))
CARPRO_11_63
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69297..69917
DNA (621bp) protein (207aa)
imidazole glycerol phosphate synthase subunit HisH rbh
imidazole glycerol phosphate synthase subunit HisH rbh
Imidazole glycerol phosphate synthase subunit hisH n=69 Tax=Propionibacterium RepID=HIS5_PROAC (db=UNIREF evalue=1.0e-81 bit_score=305.0 identity=80.49 coverage=98.0676328502416)
seg (db=Seg db_id=seg from=45 to=56)
CARPRO_11_64
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69931..70698
DNA (768bp) protein (256aa)
phosphoribosyl isomerase A (EC:5.3.1.24)
phosphoribosyl isomerase A (EC:5.3.1.24)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Propionibacterium RepID=E4ABV5_PROAA (db=UNIREF evalue=4.0e-130 bit_score=467.0 identity=91.76 coverage=99.21875)
hisA-trpF: bifunctional HisA/TrpF protein (db=HMMTigr db_id=TIGR01919 from=1 to=241 evalue=1.6e-120 interpro_id=IPR010188 interpro_description=Bifunctional HisA/TrpF GO=Biological Process: histidine biosynthetic process (GO:0000105), Biological Process: tryptophan biosynthetic process (GO:0000162), Molecular Function: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity (GO:0003949), Molecular Function: phosphoribosylanthranilate isomerase activity (GO:0
CARPRO_11_65
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70849..71643
DNA (795bp) protein (265aa)
hypothetical protein
hypothetical protein
UPF0082 protein PPA1157 n=73 Tax=Propionibacterium RepID=Y1157_PROAC (db=UNIREF evalue=7.0e-145 bit_score=516.0 identity=96.21 coverage=99.2452830188679)
TIGR01033: DNA-binding regulatory protein, (db=HMMTigr db_id=TIGR01033 from=1 to=251 evalue=5.3e-94 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
CARPRO_11_66
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71640..72230
DNA (591bp) protein (197aa)
crossover junction endodeoxyribonuclease RuvC
seg (db=Seg db_id=seg from=147 to=161)
seg (db=Seg db_id=seg from=95 to=106)
seg (db=Seg db_id=seg from=26 to=35)
CARPRO_11_67
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72227..72832
DNA (606bp) protein (202aa)
ruvA; Holliday junction DNA helicase RuvA rbh
ruvA; Holliday junction DNA helicase RuvA rbh
Holliday junction ATP-dependent DNA helicase ruvA n=69 Tax=Propionibacterium RepID=RUVA_PROAC (db=UNIREF evalue=1.0e-91 bit_score=339.0 identity=80.6 coverage=99.009900990099)
ruvA: Holliday junction DNA helicase RuvA (db=HMMTigr db_id=TIGR00084 from=1 to=197 evalue=3.3e-35 interpro_id=IPR000085 interpro_description=Bacterial DNA recombination protein RuvA GO=Molecular Function: DNA helicase activity (GO:0003678), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
CARPRO_11_68
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72886..73908
DNA (1023bp) protein (341aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-) rbh
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-) rbh
Holliday junction ATP-dependent DNA helicase ruvB n=73 Tax=Propionibacterium RepID=RUVB_PROAC (db=UNIREF evalue=4.0e-171 bit_score=604.0 identity=94.41 coverage=99.4134897360704)
seg (db=Seg db_id=seg from=8 to=23)
CARPRO_11_69
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73971..74408
DNA (438bp) protein (146aa)
translocase subunit
Translocase subunit n=69 Tax=Propionibacterium RepID=Q6A8K6_PROAC (db=UNIREF evalue=5.0e-37 bit_score=156.0 identity=80.51 coverage=80.1369863013699)
YajC (db=HMMPfam db_id=PF02699 from=9 to=90 evalue=3.3e-18 interpro_id=IPR003849 interpro_description=Preprotein translocase YajC)
YajC (db=HMMTigr db_id=TIGR00739 from=14 to=89 evalue=9.60000000000001e-15 interpro_id=IPR003849 interpro_description=Preprotein translocase YajC)
CARPRO_11_70
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74482..76125
DNA (1644bp) protein (548aa)
preprotein translocase subunit SecD
preprotein translocase subunit SecD
Preprotein translocase subunit SecD n=4 Tax=Propionibacterium RepID=F3P0W3_9ACTO (db=UNIREF evalue=0.0 bit_score=825.0 identity=86.68 coverage=99.4525547445255)
transmembrane_regions (db=TMHMM db_id=tmhmm from=366 to=388)
CARPRO_11_71
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76127..77296
DNA (1170bp) protein (390aa)
secF; preprotein translocase subunit SecF
secF; preprotein translocase subunit SecF
Export membrane protein SecF n=69 Tax=Propionibacterium RepID=D4HDX0_PROAS (db=UNIREF evalue=1.0e-159 bit_score=566.0 identity=87.72 coverage=99.4871794871795)
3a0501s07 (db=HMMTigr db_id=TIGR00966 from=67 to=320 evalue=3.09999999999998e-63 interpro_id=IPR005665 interpro_description=Protein translocase subunit SecF, bacterial GO=Biological Process: intracellular protein transport (GO:0006886), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450))
CARPRO_11_72
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77293..77826
DNA (534bp) protein (178aa)
adenine phosphoribosyltransferase
adenine phosphoribosyltransferase
Adenine phosphoribosyltransferase n=73 Tax=Propionibacterium RepID=APT_PROAC (db=UNIREF evalue=6.0e-87 bit_score=322.0 identity=92.09 coverage=98.876404494382)
apt: adenine phosphoribosyltransferase (db=HMMTigr db_id=TIGR01090 from=8 to=177 evalue=2.4e-71 interpro_id=IPR005764 interpro_description=Adenine phosphoribosyl transferase GO=Molecular Function: adenine phosphoribosyltransferase activity (GO:0003999), Cellular Component: cytoplasm (GO:0005737), Biological Process: adenine salvage (GO:0006168))
CARPRO_11_73
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77829..78923
DNA (1095bp) protein (365aa)
Ion channel
Ion channel
Ion channel n=51 Tax=Propionibacterium RepID=D4HDX2_PROAS (db=UNIREF evalue=0.0 bit_score=655.0 identity=92.31 coverage=99.4520547945205)
seg (db=Seg db_id=seg from=78 to=84)
CARPRO_11_74
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79065..81386
DNA (2322bp) protein (774aa)
GTP pyrophosphokinase rbh
GTP pyrophosphokinase rbh
GTP Pyrophosphokinase, (P)ppGpp synthetase I n=73 Tax=Propionibacterium RepID=D4HDX3_PROAS (db=UNIREF evalue=0.0 bit_score=1471.0 identity=93.28 coverage=99.7416020671835)
seg (db=Seg db_id=seg from=24 to=34)
CARPRO_11_75
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81482..82777)
DNA (1296bp) protein (432aa)
putative DNA repair ATPase rbh
putative DNA repair ATPase rbh
ATPase n=73 Tax=Propionibacterium RepID=F1TNT0_PROAA (db=UNIREF evalue=0.0 bit_score=754.0 identity=91.65 coverage=99.537037037037)
coiled-coil (db=Coil db_id=coil from=342 to=363 evalue=NA)
CARPRO_11_76
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82854..83429
DNA (576bp) protein (192aa)
metallo-beta-lactamase domain-containing protein
metallo-beta-lactamase domain-containing protein
Metallo-beta-lactamase domain protein n=7 Tax=Propionibacterium RepID=D4HDX5_PROAS (db=UNIREF evalue=3.0e-94 bit_score=347.0 identity=85.79 coverage=98.4375)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=9 to=189 evalue=2.8e-34)
CARPRO_11_77
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


83558..84922
DNA (1365bp) protein (455aa)
hisS; histidyl-tRNA ligase (EC:6.1.1.21)
hisS; histidyl-tRNA ligase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYH_PROAC (db=UNIREF evalue=0.0 bit_score=871.0 identity=91.85 coverage=99.5604395604396)
AA_TRNA_LIGASE_II (db=ProfileScan db_id=PS50862 from=20 to=353 evalue=0.0 interpro_id=IPR006195 interpro_description=Aminoacyl-tRNA synthetase, class II GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
CARPRO_11_78
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84996..85688)
DNA (693bp) protein (231aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=4 Tax=Propionibacterium RepID=E4ABL4_PROAA (db=UNIREF evalue=8.0e-106 bit_score=386.0 identity=89.87 coverage=97.8354978354978)
seg (db=Seg db_id=seg from=204 to=216)
CARPRO_11_79
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85682..86245)
DNA (564bp) protein (188aa)
acetyltransferase rbh
seg (db=Seg db_id=seg from=99 to=112)
seg (db=Seg db_id=seg from=6 to=23)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=3 to=179 evalue=1.7e-46 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
CARPRO_11_80
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86280..90662)
DNA (4383bp) protein (1461aa)
activator of (R)-2-hydroxyglutaryl-CoA dehydratase
activator of (R)-2-hydroxyglutaryl-CoA dehydratase
Activator of 2-hydroxyglutaryl-CoA dehydratase fused to uncharacterized conserved protein n=73 Tax=Propionibacterium RepID=Q6A8J4_PROAC (db=UNIREF evalue=0.0 bit_score=2786.0 identity=92.74 coverage=99.8631074606434)
seg (db=Seg db_id=seg from=35 to=51)
CARPRO_11_81
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90799..91452
DNA (654bp) protein (218aa)
TetR family transcriptional regulator
TetR family transcriptional regulator
Transcriptional regulator, TetR family n=2 Tax=Propionibacterium acnes RepID=E4ABL1_PROAA (db=UNIREF evalue=2.0e-84 bit_score=315.0 identity=87.86 coverage=78.8990825688073)
seg (db=Seg db_id=seg from=11 to=39)
CARPRO_11_82
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91576..92646
DNA (1071bp) protein (357aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=73 Tax=Propionibacterium RepID=D4HDY1_PROAS (db=UNIREF evalue=0.0 bit_score=671.0 identity=88.73 coverage=99.1596638655462)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=161 to=321 evalue=4.1e-06)
CARPRO_11_83
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


92828..94651
DNA (1824bp) protein (608aa)
aspS; aspartyl-tRNA ligase (EC:6.1.1.12) rbh
aspS; aspartyl-tRNA ligase (EC:6.1.1.12) rbh
Aspartyl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYD_PROAC (db=UNIREF evalue=0.0 bit_score=1155.0 identity=95.39 coverage=99.1776315789474)
seg (db=Seg db_id=seg from=566 to=577)
CARPRO_11_84
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94708..96150
DNA (1443bp) protein (481aa)
recombination factor protein RarA rbh
recombination factor protein RarA rbh
Recombination factor protein RarA n=72 Tax=Propionibacterium RepID=D4HDY3_PROAS (db=UNIREF evalue=0.0 bit_score=719.0 identity=94.76 coverage=95.010395010395)
seg (db=Seg db_id=seg from=2 to=20)
CARPRO_11_85
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96147..96608
DNA (462bp) protein (154aa)
hypothetical protein
seg (db=Seg db_id=seg from=115 to=124)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=7 to=29)
CARPRO_11_86
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


96781..99459
DNA (2679bp) protein (893aa)
alaS; alanyl-tRNA ligase (EC:6.1.1.7) rbh
alaS; alanyl-tRNA ligase (EC:6.1.1.7) rbh
seg (db=Seg db_id=seg from=839 to=848)
seg (db=Seg db_id=seg from=868 to=892)
CARPRO_11_87
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99456..99938
DNA (483bp) protein (161aa)
RNAse YqgF
Resolv_Hlld_junc_YqgF-like (db=Gene3D db_id=G3DSA:3.30.420.140 from=14 to=150 evalue=1.70000000000001e-40 interpro_id=IPR006641 interpro_description=YqgF/RNase H-like domain GO=Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
UPF0081 (db=HMMPfam db_id=PF03652 from=14 to=145 evalue=1.29999999999998e-39 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
RNaseH_fold (db=superfamily db_id=SSF53098 from=11 to=147 evalue=1.10000150671643e-33 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
CARPRO_11_88
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99935..101044
DNA (1110bp) protein (370aa)
hypothetical protein rbh
hypothetical protein rbh
Aminodeoxychorismate lyase n=72 Tax=Propionibacterium RepID=Q6A8I6_PROAC (db=UNIREF evalue=0.0 bit_score=676.0 identity=89.7 coverage=99.4594594594595)
seg (db=Seg db_id=seg from=21 to=33)
CARPRO_11_89
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101061..101867
DNA (807bp) protein (269aa)
shikimate 5-dehydrogenase
shikimate 5-dehydrogenase
Shikimate 5-dehydrogenase n=69 Tax=Propionibacterium RepID=Q6A8I5_PROAC (db=UNIREF evalue=2.0e-118 bit_score=429.0 identity=79.1 coverage=99.2565055762082)
PTHR21089 (db=HMMPanther db_id=PTHR21089 from=1 to=266 evalue=3.99998544139406e-58)
CARPRO_11_90
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101881..103077
DNA (1197bp) protein (399aa)
chorismate synthase (EC:4.2.3.5)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=69 Tax=Propionibacterium RepID=AROC_PROAC (db=UNIREF evalue=2.0e-172 bit_score=608.0 identity=88.44 coverage=99.4987468671679)
CHORISMATE_SYNTHASE_2 (db=PatternScan db_id=PS00788 from=134 to=150 evalue=0.0 interpro_id=IPR020541 interpro_description=Chorismate synthase, conserved site GO=Molecular Function: chorismate synthase activity (GO:0004107), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
Displaying items 61-90 of 292 in total

View Taxonomy