Alias: CARPRO_17
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARPRO_11_181
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(197090..197773)
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RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor n=69 Tax=Propionibacterium RepID=Q6A8A1_PROAC (db=UNIREF evalue=4.0e-107 bit_score=390.0 identity=90.67 coverage=98.2456140350877)
seg (db=Seg db_id=seg from=14 to=31)
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CARPRO_11_182
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
197997..198611
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hypothetical protein
rbh
coiled-coil (db=Coil db_id=coil from=174 to=202 evalue=NA)
seg (db=Seg db_id=seg from=179 to=201)
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CARPRO_11_183
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
198601..199890
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3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
rbh
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=69 Tax=Propionibacterium RepID=D4HE77_PROAS (db=UNIREF evalue=0.0 bit_score=672.0 identity=79.44 coverage=99.3023255813954)
seg (db=Seg db_id=seg from=243 to=253)
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CARPRO_11_184
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
199891..200892
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putative GTPase
putative GTPase
Ribosome small subunit-dependent GTPase A n=70 Tax=Propionibacterium RepID=D4HE78_PROAS (db=UNIREF evalue=2.0e-148 bit_score=528.0 identity=83.78 coverage=99.4011976047904)
seg (db=Seg db_id=seg from=21 to=34)
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CARPRO_11_185
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(200914..202431)
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hypothetical protein
rbh
hypothetical protein
rbh
Carboxypeptidase-related protein n=61 Tax=Propionibacterium RepID=Q6A897_PROAC (db=UNIREF evalue=3.0e-135 bit_score=486.0 identity=86.67 coverage=53.1620553359684)
seg (db=Seg db_id=seg from=2 to=23)
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CARPRO_11_186
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
202514..203302
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putative inositol monophosphatase
putative inositol monophosphatase
Histidinol-phosphate phosphatase HisN n=73 Tax=Propionibacterium RepID=D4HE80_PROAS (db=UNIREF evalue=4.0e-139 bit_score=497.0 identity=92.75 coverage=99.2395437262358)
IMP_1 (db=PatternScan db_id=PS00629 from=81 to=94 evalue=0.0 interpro_id=IPR020583 interpro_description=Inositol monophosphatase, metal-binding site)
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CARPRO_11_187
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(203385..204575)
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D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase n=73 Tax=Propionibacterium RepID=Q6A895_PROAC (db=UNIREF evalue=0.0 bit_score=694.0 identity=93.18 coverage=99.4962216624685)
PTHR10996 (db=HMMPanther db_id=PTHR10996 from=1 to=395 evalue=0.0)
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CARPRO_11_188
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(204622..205407)
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ABC transporter, ATP-binding protein
rbh
ABC transporter, ATP-binding protein
rbh
ABC transporter, ATP-binding protein n=68 Tax=Propionibacterium RepID=D4HE82_PROAS (db=UNIREF evalue=9.0e-126 bit_score=452.0 identity=85.82 coverage=99.236641221374)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=148 to=162 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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CARPRO_11_189
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(205404..206216)
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ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein n=73 Tax=Propionibacterium RepID=D4HE83_PROAS (db=UNIREF evalue=2.0e-125 bit_score=452.0 identity=88.85 coverage=98.8929889298893)
seg (db=Seg db_id=seg from=248 to=258)
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CARPRO_11_190
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(206216..207028)
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ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein n=73 Tax=Propionibacterium RepID=D4HE84_PROAS (db=UNIREF evalue=3.0e-111 bit_score=404.0 identity=91.11 coverage=99.2619926199262)
ABC_TM1 (db=ProfileScan db_id=PS50928 from=66 to=255 evalue=0.0 interpro_id=IPR000515 interpro_description=Binding-protein-dependent transport systems inner membrane component GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
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CARPRO_11_191
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(207025..208002)
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ABC transporter, permease protein
rbh
ABC transporter, permease protein
rbh
ABC transporter permease protein n=73 Tax=Propionibacterium RepID=Q6A891_PROAC (db=UNIREF evalue=1.0e-134 bit_score=483.0 identity=89.54 coverage=99.3865030674847)
seg (db=Seg db_id=seg from=103 to=116)
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CARPRO_11_192
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(207999..209486)
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ABC transporter substrate-binding protein
rbh
ABC transporter substrate-binding protein
rbh
Bacterial extracellular solute-binding protein, family 5 n=73 Tax=Propionibacterium RepID=D4HE86_PROAS (db=UNIREF evalue=0.0 bit_score=831.0 identity=90.1 coverage=99.5967741935484)
seg (db=Seg db_id=seg from=7 to=16)
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CARPRO_11_193
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(209737..210117)
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seg (db=Seg db_id=seg from=42 to=57)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=25 to=101 evalue=1.1e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=39 to=93 evalue=9.484 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Uncharacterized protein {ECO:0000313|EMBL:ERS24466.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_194
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
210443..211552
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transposase IS3510b
rbh
transposase IS3510b
rbh
Putative uncharacterized protein n=2 Tax=Dietzia cinnamea P4 RepID=E6JCW8_9ACTO (db=UNIREF evalue=1.0e-139 bit_score=499.0 identity=72.62 coverage=90.5405405405405)
seg (db=Seg db_id=seg from=344 to=369)
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CARPRO_11_195
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
211662..211853
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seg (db=Seg db_id=seg from=30 to=50)
Uncharacterized protein {ECO:0000313|EMBL:ERS65911.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_196
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
212021..212665
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Co/Zn/Cd efflux system protein
G3DSA:1.20.1510.10 (db=Gene3D db_id=G3DSA:1.20.1510.10 from=20 to=190 evalue=1.3e-19)
Cation_efflux (db=HMMPfam db_id=PF01545 from=29 to=190 evalue=2.2e-08 interpro_id=IPR002524 interpro_description=Cation efflux protein GO=Biological Process: cation transport (GO:0006812), Molecular Function: cation transmembrane transporter activity (GO:0008324), Cellular Component: integral to membrane (GO:0016021), Biological Process: transmembrane transport (GO:0055085))
CDF family cation diffusion facilitator n=2 Tax=Propionibacterium avidum RepID=G4CYZ2_9ACTO
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CARPRO_11_197
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(212739..213314)
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universal stress protein UspA
SSF52402 (db=superfamily db_id=SSF52402 from=44 to=179 evalue=9.40001006865064e-11)
Rossmann-like_a/b/a_fold (db=Gene3D db_id=G3DSA:3.40.50.620 from=46 to=179 evalue=6.70000000000001e-10 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Usp (db=HMMPfam db_id=PF00582 from=38 to=179 evalue=5.5e-07 interpro_id=IPR006016 interpro_description=UspA GO=Biological Process: response to stress (GO:0006950))
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CARPRO_11_198
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(213392..213934)
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hypothetical protein
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAL9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS24473.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_199
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(213952..214848)
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protease
protease
Lon protease (S16) C-terminal proteolytic domain protein n=69 Tax=Propionibacterium RepID=D4HE92_PROAS (db=UNIREF evalue=2.0e-147 bit_score=525.0 identity=89.26 coverage=99.3311036789298)
seg (db=Seg db_id=seg from=77 to=85)
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CARPRO_11_200
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
215086..216606
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hypothetical protein
rbh
hypothetical protein
rbh
Conserved protein n=73 Tax=Propionibacterium RepID=Q6A855_PROAC (db=UNIREF evalue=0.0 bit_score=774.0 identity=94.47 coverage=88.9546351084813)
seg (db=Seg db_id=seg from=259 to=271)
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CARPRO_11_201
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(216594..217217)
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metal-dependent hydrolase
metal-dependent hydrolase
Predicted metal-dependent hydrolase n=69 Tax=Propionibacterium RepID=Q6A854_PROAC (db=UNIREF evalue=3.0e-82 bit_score=308.0 identity=77.29 coverage=99.0384615384615)
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CARPRO_11_202
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
217729..218340
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hypothetical protein
Putative uncharacterized protein n=62 Tax=Propionibacterium acnes RepID=Q6A853_PROAC (db=UNIREF evalue=4.0e-71 bit_score=270.0 identity=67.49 coverage=98.5294117647059)
Uncharacterized protein {ECO:0000313|EMBL:ERS65918.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_203
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(218298..220505)
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UvrD/REP helicase
UvrD/REP helicase
HRDC domain protein n=2 Tax=Propionibacterium acnes RepID=D1YBS7_PROAA (db=UNIREF evalue=0.0 bit_score=1260.0 identity=87.43 coverage=94.8369565217391)
seg (db=Seg db_id=seg from=7 to=24)
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CARPRO_11_204
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
220544..223702
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putative exodeoxyribonuclease V, gamma subunit
rbh
putative exodeoxyribonuclease V, gamma subunit
rbh
Putative exodeoxyribonuclease V, gamma subunit n=4 Tax=Propionibacterium RepID=E4ABU3_PROAA (db=UNIREF evalue=0.0 bit_score=1432.0 identity=74.29 coverage=99.6201329534663)
seg (db=Seg db_id=seg from=258 to=272)
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CARPRO_11_205
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
223699..226932
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putative exodeoxyribonuclease V, beta subunit
rbh
putative exodeoxyribonuclease V, beta subunit
rbh
Exodeoxyribonuclease V beta chain n=70 Tax=Propionibacterium RepID=Q6A850_PROAC (db=UNIREF evalue=0.0 bit_score=1654.0 identity=77.83 coverage=99.721706864564)
seg (db=Seg db_id=seg from=908 to=919)
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CARPRO_11_206
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
226925..228793
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exonuclease V subunit alpha
exonuclease V subunit alpha
Exonuclease V, alpha chain n=4 Tax=Propionibacterium RepID=F3NYD1_9ACTO (db=UNIREF evalue=0.0 bit_score=938.0 identity=83.2 coverage=99.5184590690209)
RecD (db=HMMTigr db_id=TIGR01447 from=16 to=615 evalue=3.70000000000004e-117 interpro_id=IPR006344 interpro_description=Exodeoxyribonuclease V, alpha subunit GO=Molecular Function: exodeoxyribonuclease V activity (GO:0008854), Cellular Component: exodeoxyribonuclease V complex (GO:0009338))
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CARPRO_11_207
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(228825..229622)
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NUDIX family hydrolase
NUDIX family hydrolase
Hydrolase, NUDIX family n=63 Tax=Propionibacterium RepID=D4HEA1_PROAS (db=UNIREF evalue=8.0e-118 bit_score=426.0 identity=79.17 coverage=98.8721804511278)
NUDIX (db=ProfileScan db_id=PS51462 from=115 to=238 evalue=0.0 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
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CARPRO_11_208
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(229747..232995)
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UvrD/REP helicase
rbh
UvrD/REP helicase
rbh
UvrD/REP helicase n=4 Tax=Propionibacterium RepID=E4ABT9_PROAA (db=UNIREF evalue=0.0 bit_score=1500.0 identity=74.55 coverage=97.6915974145891)
seg (db=Seg db_id=seg from=840 to=858)
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CARPRO_11_209
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(232992..234986)
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UvrD/REP helicase
UvrD/REP helicase
UvrD/REP helicase n=69 Tax=Propionibacterium RepID=D4HEA3_PROAS (db=UNIREF evalue=0.0 bit_score=848.0 identity=73.52 coverage=98.1954887218045)
seg (db=Seg db_id=seg from=613 to=624)
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CARPRO_11_210
unknown
|
Not on your lists |
235332..235562
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235332..235562 + ( gc_cont=0.571)
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