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CARPRO_11

Alias: CARPRO_17

Search features with annotation key words

Displaying items 181-210 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_11_181
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(197090..197773)
DNA (684bp) protein (228aa)
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor n=69 Tax=Propionibacterium RepID=Q6A8A1_PROAC (db=UNIREF evalue=4.0e-107 bit_score=390.0 identity=90.67 coverage=98.2456140350877)
seg (db=Seg db_id=seg from=14 to=31)
CARPRO_11_182
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

197997..198611
DNA (615bp) protein (205aa)
hypothetical protein rbh
coiled-coil (db=Coil db_id=coil from=174 to=202 evalue=NA)
seg (db=Seg db_id=seg from=179 to=201)
(db=HMMPfam db_id=PF07681 from=6 to=101 evalue=3.3e-08 interpro_id=IPR011637 interpro_description=Uncharacterised protein family YphA)
CARPRO_11_183
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

198601..199890
DNA (1290bp) protein (430aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=69 Tax=Propionibacterium RepID=D4HE77_PROAS (db=UNIREF evalue=0.0 bit_score=672.0 identity=79.44 coverage=99.3023255813954)
seg (db=Seg db_id=seg from=243 to=253)
CARPRO_11_184
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

199891..200892
DNA (1002bp) protein (334aa)
putative GTPase
putative GTPase
Ribosome small subunit-dependent GTPase A n=70 Tax=Propionibacterium RepID=D4HE78_PROAS (db=UNIREF evalue=2.0e-148 bit_score=528.0 identity=83.78 coverage=99.4011976047904)
seg (db=Seg db_id=seg from=21 to=34)
CARPRO_11_185
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(200914..202431)
DNA (1518bp) protein (506aa)
hypothetical protein rbh
hypothetical protein rbh
Carboxypeptidase-related protein n=61 Tax=Propionibacterium RepID=Q6A897_PROAC (db=UNIREF evalue=3.0e-135 bit_score=486.0 identity=86.67 coverage=53.1620553359684)
seg (db=Seg db_id=seg from=2 to=23)
CARPRO_11_186
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202514..203302
DNA (789bp) protein (263aa)
putative inositol monophosphatase
putative inositol monophosphatase
Histidinol-phosphate phosphatase HisN n=73 Tax=Propionibacterium RepID=D4HE80_PROAS (db=UNIREF evalue=4.0e-139 bit_score=497.0 identity=92.75 coverage=99.2395437262358)
IMP_1 (db=PatternScan db_id=PS00629 from=81 to=94 evalue=0.0 interpro_id=IPR020583 interpro_description=Inositol monophosphatase, metal-binding site)
CARPRO_11_187
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(203385..204575)
DNA (1191bp) protein (397aa)
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase n=73 Tax=Propionibacterium RepID=Q6A895_PROAC (db=UNIREF evalue=0.0 bit_score=694.0 identity=93.18 coverage=99.4962216624685)
PTHR10996 (db=HMMPanther db_id=PTHR10996 from=1 to=395 evalue=0.0)
CARPRO_11_188
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(204622..205407)
DNA (786bp) protein (262aa)
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein n=68 Tax=Propionibacterium RepID=D4HE82_PROAS (db=UNIREF evalue=9.0e-126 bit_score=452.0 identity=85.82 coverage=99.236641221374)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=148 to=162 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
CARPRO_11_189
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(205404..206216)
DNA (813bp) protein (271aa)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein n=73 Tax=Propionibacterium RepID=D4HE83_PROAS (db=UNIREF evalue=2.0e-125 bit_score=452.0 identity=88.85 coverage=98.8929889298893)
seg (db=Seg db_id=seg from=248 to=258)
CARPRO_11_190
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(206216..207028)
DNA (813bp) protein (271aa)
ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein n=73 Tax=Propionibacterium RepID=D4HE84_PROAS (db=UNIREF evalue=3.0e-111 bit_score=404.0 identity=91.11 coverage=99.2619926199262)
ABC_TM1 (db=ProfileScan db_id=PS50928 from=66 to=255 evalue=0.0 interpro_id=IPR000515 interpro_description=Binding-protein-dependent transport systems inner membrane component GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
CARPRO_11_191
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(207025..208002)
DNA (978bp) protein (326aa)
ABC transporter, permease protein rbh
ABC transporter, permease protein rbh
ABC transporter permease protein n=73 Tax=Propionibacterium RepID=Q6A891_PROAC (db=UNIREF evalue=1.0e-134 bit_score=483.0 identity=89.54 coverage=99.3865030674847)
seg (db=Seg db_id=seg from=103 to=116)
CARPRO_11_192
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(207999..209486)
DNA (1488bp) protein (496aa)
ABC transporter substrate-binding protein rbh
ABC transporter substrate-binding protein rbh
Bacterial extracellular solute-binding protein, family 5 n=73 Tax=Propionibacterium RepID=D4HE86_PROAS (db=UNIREF evalue=0.0 bit_score=831.0 identity=90.1 coverage=99.5967741935484)
seg (db=Seg db_id=seg from=7 to=16)
CARPRO_11_193
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(209737..210117)
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=42 to=57)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=25 to=101 evalue=1.1e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=39 to=93 evalue=9.484 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Uncharacterized protein {ECO:0000313|EMBL:ERS24466.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_194
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

210443..211552
DNA (1110bp) protein (370aa)
transposase IS3510b rbh
transposase IS3510b rbh
Putative uncharacterized protein n=2 Tax=Dietzia cinnamea P4 RepID=E6JCW8_9ACTO (db=UNIREF evalue=1.0e-139 bit_score=499.0 identity=72.62 coverage=90.5405405405405)
seg (db=Seg db_id=seg from=344 to=369)
CARPRO_11_195
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

211662..211853
DNA (192bp) protein (64aa)
seg (db=Seg db_id=seg from=30 to=50)
Uncharacterized protein {ECO:0000313|EMBL:ERS65911.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_196
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

212021..212665
DNA (645bp) protein (215aa)
Co/Zn/Cd efflux system protein
G3DSA:1.20.1510.10 (db=Gene3D db_id=G3DSA:1.20.1510.10 from=20 to=190 evalue=1.3e-19)
Cation_efflux (db=HMMPfam db_id=PF01545 from=29 to=190 evalue=2.2e-08 interpro_id=IPR002524 interpro_description=Cation efflux protein GO=Biological Process: cation transport (GO:0006812), Molecular Function: cation transmembrane transporter activity (GO:0008324), Cellular Component: integral to membrane (GO:0016021), Biological Process: transmembrane transport (GO:0055085))
CDF family cation diffusion facilitator n=2 Tax=Propionibacterium avidum RepID=G4CYZ2_9ACTO
CARPRO_11_197
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(212739..213314)
DNA (576bp) protein (192aa)
universal stress protein UspA
SSF52402 (db=superfamily db_id=SSF52402 from=44 to=179 evalue=9.40001006865064e-11)
Rossmann-like_a/b/a_fold (db=Gene3D db_id=G3DSA:3.40.50.620 from=46 to=179 evalue=6.70000000000001e-10 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Usp (db=HMMPfam db_id=PF00582 from=38 to=179 evalue=5.5e-07 interpro_id=IPR006016 interpro_description=UspA GO=Biological Process: response to stress (GO:0006950))
CARPRO_11_198
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(213392..213934)
DNA (543bp) protein (181aa)
hypothetical protein
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAL9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS24473.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_199
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(213952..214848)
DNA (897bp) protein (299aa)
protease
protease
Lon protease (S16) C-terminal proteolytic domain protein n=69 Tax=Propionibacterium RepID=D4HE92_PROAS (db=UNIREF evalue=2.0e-147 bit_score=525.0 identity=89.26 coverage=99.3311036789298)
seg (db=Seg db_id=seg from=77 to=85)
CARPRO_11_200
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

215086..216606
DNA (1521bp) protein (507aa)
hypothetical protein rbh
hypothetical protein rbh
Conserved protein n=73 Tax=Propionibacterium RepID=Q6A855_PROAC (db=UNIREF evalue=0.0 bit_score=774.0 identity=94.47 coverage=88.9546351084813)
seg (db=Seg db_id=seg from=259 to=271)
CARPRO_11_201
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(216594..217217)
DNA (624bp) protein (208aa)
metal-dependent hydrolase
metal-dependent hydrolase
Predicted metal-dependent hydrolase n=69 Tax=Propionibacterium RepID=Q6A854_PROAC (db=UNIREF evalue=3.0e-82 bit_score=308.0 identity=77.29 coverage=99.0384615384615)
DUF45 (db=HMMPfam db_id=PF01863 from=80 to=183 evalue=6.90000000000001e-29 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
CARPRO_11_202
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

217729..218340
DNA (612bp) protein (204aa)
hypothetical protein
Putative uncharacterized protein n=62 Tax=Propionibacterium acnes RepID=Q6A853_PROAC (db=UNIREF evalue=4.0e-71 bit_score=270.0 identity=67.49 coverage=98.5294117647059)
Uncharacterized protein {ECO:0000313|EMBL:ERS65918.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_203
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218298..220505)
DNA (2208bp) protein (736aa)
UvrD/REP helicase
UvrD/REP helicase
HRDC domain protein n=2 Tax=Propionibacterium acnes RepID=D1YBS7_PROAA (db=UNIREF evalue=0.0 bit_score=1260.0 identity=87.43 coverage=94.8369565217391)
seg (db=Seg db_id=seg from=7 to=24)
CARPRO_11_204
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

220544..223702
DNA (3159bp) protein (1053aa)
putative exodeoxyribonuclease V, gamma subunit rbh
putative exodeoxyribonuclease V, gamma subunit rbh
Putative exodeoxyribonuclease V, gamma subunit n=4 Tax=Propionibacterium RepID=E4ABU3_PROAA (db=UNIREF evalue=0.0 bit_score=1432.0 identity=74.29 coverage=99.6201329534663)
seg (db=Seg db_id=seg from=258 to=272)
CARPRO_11_205
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

223699..226932
DNA (3234bp) protein (1078aa)
putative exodeoxyribonuclease V, beta subunit rbh
putative exodeoxyribonuclease V, beta subunit rbh
Exodeoxyribonuclease V beta chain n=70 Tax=Propionibacterium RepID=Q6A850_PROAC (db=UNIREF evalue=0.0 bit_score=1654.0 identity=77.83 coverage=99.721706864564)
seg (db=Seg db_id=seg from=908 to=919)
CARPRO_11_206
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

226925..228793
DNA (1869bp) protein (623aa)
exonuclease V subunit alpha
exonuclease V subunit alpha
Exonuclease V, alpha chain n=4 Tax=Propionibacterium RepID=F3NYD1_9ACTO (db=UNIREF evalue=0.0 bit_score=938.0 identity=83.2 coverage=99.5184590690209)
RecD (db=HMMTigr db_id=TIGR01447 from=16 to=615 evalue=3.70000000000004e-117 interpro_id=IPR006344 interpro_description=Exodeoxyribonuclease V, alpha subunit GO=Molecular Function: exodeoxyribonuclease V activity (GO:0008854), Cellular Component: exodeoxyribonuclease V complex (GO:0009338))
CARPRO_11_207
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228825..229622)
DNA (798bp) protein (266aa)
NUDIX family hydrolase
NUDIX family hydrolase
Hydrolase, NUDIX family n=63 Tax=Propionibacterium RepID=D4HEA1_PROAS (db=UNIREF evalue=8.0e-118 bit_score=426.0 identity=79.17 coverage=98.8721804511278)
NUDIX (db=ProfileScan db_id=PS51462 from=115 to=238 evalue=0.0 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
CARPRO_11_208
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(229747..232995)
DNA (3249bp) protein (1083aa)
UvrD/REP helicase rbh
UvrD/REP helicase rbh
UvrD/REP helicase n=4 Tax=Propionibacterium RepID=E4ABT9_PROAA (db=UNIREF evalue=0.0 bit_score=1500.0 identity=74.55 coverage=97.6915974145891)
seg (db=Seg db_id=seg from=840 to=858)
CARPRO_11_209
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(232992..234986)
DNA (1995bp) protein (665aa)
UvrD/REP helicase
UvrD/REP helicase
UvrD/REP helicase n=69 Tax=Propionibacterium RepID=D4HEA3_PROAS (db=UNIREF evalue=0.0 bit_score=848.0 identity=73.52 coverage=98.1954887218045)
seg (db=Seg db_id=seg from=613 to=624)
CARPRO_11_210
unknown

Not on your lists

235332..235562
DNA (231bp) protein (77aa)
235332..235562 + ( gc_cont=0.571)
Displaying items 181-210 of 292 in total

View Taxonomy