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CARPRO_11

Alias: CARPRO_17

Search features with annotation key words

Displaying items 211-240 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_11_211
unknown

Not on your lists

235971..236378
DNA (408bp) protein (136aa)
235971..236378 + ( gc_cont=0.615)
CARPRO_11_212
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

236474..237337
DNA (864bp) protein (288aa)
hypothetical protein rbh
hypothetical protein rbh
Protein phosphatase 2C n=4 Tax=Propionibacterium RepID=E4ABT7_PROAA (db=UNIREF evalue=9.0e-116 bit_score=420.0 identity=79.44 coverage=98.6111111111111)
seg (db=Seg db_id=seg from=231 to=244)
CARPRO_11_213
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

237359..237586
DNA (228bp) protein (76aa)
ATP-binding protein
DUF3107 (db=HMMPfam db_id=PF11305 from=1 to=74 evalue=4.2e-27 interpro_id=IPR021456 interpro_description=Protein of unknown function DUF3107)
ATP-binding protein n=2 Tax=Propionibacterium avidum RepID=G4CYX6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS65927.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_214
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(237679..238350)
DNA (672bp) protein (224aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=4 Tax=Propionibacterium RepID=E4ABT5_PROAA (db=UNIREF evalue=1.0e-99 bit_score=365.0 identity=78.92 coverage=99.1071428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
CARPRO_11_215
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

238495..240120
DNA (1626bp) protein (542aa)
putative ATP-dependent RNA helicase rbh
putative ATP-dependent RNA helicase rbh
DEAD/DEAH box helicase n=69 Tax=Propionibacterium RepID=D4HEA7_PROAS (db=UNIREF evalue=0.0 bit_score=780.0 identity=90.33 coverage=78.0442804428044)
seg (db=Seg db_id=seg from=429 to=483)
CARPRO_11_216
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(240186..241277)
DNA (1092bp) protein (364aa)
tryptophanyl-tRNA synthetase rbh
tryptophanyl-tRNA synthetase rbh
Tryptophan--tRNA ligase n=73 Tax=Propionibacterium RepID=D4HEA9_PROAS (db=UNIREF evalue=0.0 bit_score=693.0 identity=92.29 coverage=99.4505494505495)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=44 to=53 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
CARPRO_11_217
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(241423..242283)
DNA (861bp) protein (287aa)
metal-dependent phosphoesterase
metal-dependent phosphoesterase
PHP domain protein n=73 Tax=Propionibacterium RepID=D4HEB0_PROAS (db=UNIREF evalue=1.0e-147 bit_score=525.0 identity=89.86 coverage=99.3031358885017)
PHP domain-like (db=superfamily db_id=SSF89550 from=1 to=256 evalue=9.8e-43 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
CARPRO_11_218
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242280..246890)
DNA (4611bp) protein (1537aa)
NAD-glutamate dehydrogenase rbh
NAD-glutamate dehydrogenase rbh
NAD-specific glutamate dehydrogenase, large form n=73 Tax=Propionibacterium RepID=D4HEB1_PROAS (db=UNIREF evalue=0.0 bit_score=2710.0 identity=86.9 coverage=99.6746909564086)
seg (db=Seg db_id=seg from=432 to=443)
CARPRO_11_219
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

247035..247517
DNA (483bp) protein (161aa)
hypothetical protein rbh
(db=HMMPfam db_id=PF10698 from=7 to=157 evalue=8.8e-34 interpro_id=IPR019639 interpro_description=Protein of unknown function DUF2505)
Uncharacterized protein {ECO:0000313|EMBL:ERS36832.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAK5_9ACTO
CARPRO_11_220
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(247546..247965)
DNA (420bp) protein (140aa)
hypothetical protein
seg (db=Seg db_id=seg from=79 to=92)
Uncharacterized protein {ECO:0000313|EMBL:EGY76688.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9VCP5_9ACTO
CARPRO_11_221
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

248223..248747
DNA (525bp) protein (175aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65935.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VCZ7_9ACTO
CARPRO_11_222
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(248796..251498)
DNA (2703bp) protein (901aa)
protein translocase subunit SecA rbh
protein translocase subunit SecA rbh
Protein translocase subunit secA n=73 Tax=Propionibacterium RepID=SECA_PROAC (db=UNIREF evalue=0.0 bit_score=1702.0 identity=93.42 coverage=97.4472807991121)
seg (db=Seg db_id=seg from=882 to=900)
CARPRO_11_223
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(251813..252424)
DNA (612bp) protein (204aa)
putative ribosomal S30AE, sigma 54 modulation protein
putative ribosomal S30AE, sigma 54 modulation protein
Ribosomal subunit interface protein n=73 Tax=Propionibacterium RepID=D4HEB6_PROAS (db=UNIREF evalue=2.0e-100 bit_score=368.0 identity=94.09 coverage=99.0196078431373)
seg (db=Seg db_id=seg from=97 to=105)
CARPRO_11_224
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(252620..253258)
DNA (639bp) protein (213aa)
putative amidophosphoribosyltransferase rbh
seg (db=Seg db_id=seg from=78 to=92)
PRTase-like (db=superfamily db_id=SSF53271 from=72 to=204 evalue=3.9e-10)
(db=HMMPfam db_id=PF00156 from=133 to=202 evalue=4.3e-06 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
CARPRO_11_225
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(253309..255090)
DNA (1782bp) protein (594aa)
membrane spanning lipoprotein rbh
membrane spanning lipoprotein rbh
Lipoprotein lpqB n=68 Tax=Propionibacterium RepID=LPQB_PROAC (db=UNIREF evalue=0.0 bit_score=799.0 identity=74.7 coverage=99.3265993265993)
seg (db=Seg db_id=seg from=226 to=244)
CARPRO_11_226
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(255087..256580)
DNA (1494bp) protein (498aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=4 Tax=Propionibacterium RepID=E4ABR8_PROAA (db=UNIREF evalue=0.0 bit_score=790.0 identity=84.21 coverage=94.3775100401606)
seg (db=Seg db_id=seg from=10 to=21)
CARPRO_11_227
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(256682..257392)
DNA (711bp) protein (237aa)
transcriptional regulatory protein, C-terminal domain protein
transcriptional regulatory protein, C-terminal domain protein
Response regulator receiver domain protein n=11 Tax=Propionibacterium RepID=E4ABR7_PROAA (db=UNIREF evalue=7.0e-119 bit_score=429.0 identity=88.56 coverage=99.1561181434599)
no description (db=HMMSmart db_id=SM00448 from=8 to=118 evalue=3.3e-41 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARPRO_11_228
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(257457..258209)
DNA (753bp) protein (251aa)
hypothetical protein rbh
hypothetical protein rbh
Conserved protein, DUF179 n=73 Tax=Propionibacterium RepID=Q6A827_PROAC (db=UNIREF evalue=2.0e-85 bit_score=319.0 identity=90.1 coverage=76.0956175298805)
seg (db=Seg db_id=seg from=89 to=105)
CARPRO_11_229
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(258241..258906)
DNA (666bp) protein (222aa)
hypothetical protein rbh
seg (db=Seg db_id=seg from=210 to=221)
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAJ9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS65943.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_230
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

259058..259549
DNA (492bp) protein (164aa)
protein-tyrosine phosphatase, low molecular weight rbh
no description (db=HMMSmart db_id=SM00226 from=24 to=149 evalue=6.8e-37 interpro_id=IPR023485 interpro_description=Phosphotyrosine protein phosphatase I superfamily)
ARSENATE REDUCTASE (db=HMMPanther db_id=PTHR11717:SF3 from=30 to=156 evalue=1.8e-35)
LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (db=HMMPanther db_id=PTHR11717 from=30 to=156 evalue=1.8e-35 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein dephosphorylation (GO:0006470))
CARPRO_11_231
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(259766..259981)
DNA (216bp) protein (72aa)
XRE family transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=65 evalue=1.3e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=65 evalue=1.5e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=7 to=59 evalue=2.7e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
CARPRO_11_232
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(259981..260433)
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=14 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
CARPRO_11_233
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261015..261437
DNA (423bp) protein (141aa)
261015..261437 + ( gc_cont=0.695)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPH06359.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HG
CARPRO_11_234
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(261482..262042)
DNA (561bp) protein (187aa)
antirestriction ArdA family protein
Antirestriction ArdA family protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LED8_GORB4 (db=UNIREF evalue=2.0e-31 bit_score=138.0 identity=46.59 coverage=91.4438502673797)
seg (db=Seg db_id=seg from=2 to=9)
(db=HMMPfam db_id=PF07275 from=17 to=172 evalue=1.3e-18 interpro_id=IPR009899 interpro_description=Antirestriction)
CARPRO_11_235
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

262230..263873
DNA (1644bp) protein (548aa)
recombinase family protein rbh
recombinase family protein rbh
Recombinase family protein n=1 Tax=Bifidobacterium bifidum PRL2010 RepID=E4NZD1_BIFBP (db=UNIREF evalue=7.0e-114 bit_score=415.0 identity=46.91 coverage=84.6715328467153)
seg (db=Seg db_id=seg from=392 to=405)
CARPRO_11_236
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264238..264861)
DNA (624bp) protein (208aa)
hypothetical protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=155)
seg (db=Seg db_id=seg from=132 to=146)
CARPRO_11_237
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264947..265480)
DNA (534bp) protein (178aa)
hypothetical protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
seg (db=Seg db_id=seg from=131 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=147)
CARPRO_11_238
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(265477..266979)
DNA (1503bp) protein (501aa)
argininosuccinate lyase rbh
argininosuccinate lyase rbh
Argininosuccinate lyase n=73 Tax=Propionibacterium RepID=ARLY_PROAC (db=UNIREF evalue=0.0 bit_score=644.0 identity=88.68 coverage=93.2135728542914)
seg (db=Seg db_id=seg from=190 to=209)
CARPRO_11_239
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(267029..268228)
DNA (1200bp) protein (400aa)
acetylornithine aminotransferase
acetylornithine aminotransferase
Aminotransferase, acetylornithine/succinylornithine family n=4 Tax=Propionibacterium RepID=F3NYH6_9ACTO (db=UNIREF evalue=0.0 bit_score=653.0 identity=82.71 coverage=99.25)
seg (db=Seg db_id=seg from=90 to=100)
CARPRO_11_240
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(268221..269171)
DNA (951bp) protein (317aa)
acetylglutamate kinase rbh
acetylglutamate kinase rbh
Acetylglutamate kinase n=73 Tax=Propionibacterium RepID=ARGB_PROAC (db=UNIREF evalue=1.0e-153 bit_score=546.0 identity=93.44 coverage=95.8990536277603)
seg (db=Seg db_id=seg from=206 to=219)
Displaying items 211-240 of 292 in total

View Taxonomy