Alias: CARPRO_17
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARPRO_11_211
unknown
|
Not on your lists |
235971..236378
|
235971..236378 + ( gc_cont=0.615)
|
|
CARPRO_11_212
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
236474..237337
|
hypothetical protein
rbh
hypothetical protein
rbh
Protein phosphatase 2C n=4 Tax=Propionibacterium RepID=E4ABT7_PROAA (db=UNIREF evalue=9.0e-116 bit_score=420.0 identity=79.44 coverage=98.6111111111111)
seg (db=Seg db_id=seg from=231 to=244)
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CARPRO_11_213
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
237359..237586
|
ATP-binding protein
DUF3107 (db=HMMPfam db_id=PF11305 from=1 to=74 evalue=4.2e-27 interpro_id=IPR021456 interpro_description=Protein of unknown function DUF3107)
ATP-binding protein n=2 Tax=Propionibacterium avidum RepID=G4CYX6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS65927.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_214
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(237679..238350)
|
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=4 Tax=Propionibacterium RepID=E4ABT5_PROAA (db=UNIREF evalue=1.0e-99 bit_score=365.0 identity=78.92 coverage=99.1071428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
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CARPRO_11_215
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
238495..240120
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putative ATP-dependent RNA helicase
rbh
putative ATP-dependent RNA helicase
rbh
DEAD/DEAH box helicase n=69 Tax=Propionibacterium RepID=D4HEA7_PROAS (db=UNIREF evalue=0.0 bit_score=780.0 identity=90.33 coverage=78.0442804428044)
seg (db=Seg db_id=seg from=429 to=483)
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CARPRO_11_216
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(240186..241277)
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tryptophanyl-tRNA synthetase
rbh
tryptophanyl-tRNA synthetase
rbh
Tryptophan--tRNA ligase n=73 Tax=Propionibacterium RepID=D4HEA9_PROAS (db=UNIREF evalue=0.0 bit_score=693.0 identity=92.29 coverage=99.4505494505495)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=44 to=53 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
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CARPRO_11_217
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(241423..242283)
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metal-dependent phosphoesterase
metal-dependent phosphoesterase
PHP domain protein n=73 Tax=Propionibacterium RepID=D4HEB0_PROAS (db=UNIREF evalue=1.0e-147 bit_score=525.0 identity=89.86 coverage=99.3031358885017)
PHP domain-like (db=superfamily db_id=SSF89550 from=1 to=256 evalue=9.8e-43 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
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CARPRO_11_218
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(242280..246890)
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NAD-glutamate dehydrogenase
rbh
NAD-glutamate dehydrogenase
rbh
NAD-specific glutamate dehydrogenase, large form n=73 Tax=Propionibacterium RepID=D4HEB1_PROAS (db=UNIREF evalue=0.0 bit_score=2710.0 identity=86.9 coverage=99.6746909564086)
seg (db=Seg db_id=seg from=432 to=443)
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CARPRO_11_219
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
247035..247517
|
hypothetical protein
rbh
(db=HMMPfam db_id=PF10698 from=7 to=157 evalue=8.8e-34 interpro_id=IPR019639 interpro_description=Protein of unknown function DUF2505)
Uncharacterized protein {ECO:0000313|EMBL:ERS36832.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAK5_9ACTO
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CARPRO_11_220
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(247546..247965)
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hypothetical protein
seg (db=Seg db_id=seg from=79 to=92)
Uncharacterized protein {ECO:0000313|EMBL:EGY76688.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9VCP5_9ACTO
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CARPRO_11_221
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
248223..248747
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hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65935.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VCZ7_9ACTO
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CARPRO_11_222
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(248796..251498)
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protein translocase subunit SecA
rbh
protein translocase subunit SecA
rbh
Protein translocase subunit secA n=73 Tax=Propionibacterium RepID=SECA_PROAC (db=UNIREF evalue=0.0 bit_score=1702.0 identity=93.42 coverage=97.4472807991121)
seg (db=Seg db_id=seg from=882 to=900)
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CARPRO_11_223
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(251813..252424)
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putative ribosomal S30AE, sigma 54 modulation protein
putative ribosomal S30AE, sigma 54 modulation protein
Ribosomal subunit interface protein n=73 Tax=Propionibacterium RepID=D4HEB6_PROAS (db=UNIREF evalue=2.0e-100 bit_score=368.0 identity=94.09 coverage=99.0196078431373)
seg (db=Seg db_id=seg from=97 to=105)
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CARPRO_11_224
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(252620..253258)
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putative amidophosphoribosyltransferase
rbh
seg (db=Seg db_id=seg from=78 to=92)
PRTase-like (db=superfamily db_id=SSF53271 from=72 to=204 evalue=3.9e-10)
(db=HMMPfam db_id=PF00156 from=133 to=202 evalue=4.3e-06 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
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CARPRO_11_225
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(253309..255090)
|
membrane spanning lipoprotein
rbh
membrane spanning lipoprotein
rbh
Lipoprotein lpqB n=68 Tax=Propionibacterium RepID=LPQB_PROAC (db=UNIREF evalue=0.0 bit_score=799.0 identity=74.7 coverage=99.3265993265993)
seg (db=Seg db_id=seg from=226 to=244)
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CARPRO_11_226
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(255087..256580)
|
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=4 Tax=Propionibacterium RepID=E4ABR8_PROAA (db=UNIREF evalue=0.0 bit_score=790.0 identity=84.21 coverage=94.3775100401606)
seg (db=Seg db_id=seg from=10 to=21)
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CARPRO_11_227
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(256682..257392)
|
transcriptional regulatory protein, C-terminal domain protein
transcriptional regulatory protein, C-terminal domain protein
Response regulator receiver domain protein n=11 Tax=Propionibacterium RepID=E4ABR7_PROAA (db=UNIREF evalue=7.0e-119 bit_score=429.0 identity=88.56 coverage=99.1561181434599)
no description (db=HMMSmart db_id=SM00448 from=8 to=118 evalue=3.3e-41 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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CARPRO_11_228
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(257457..258209)
|
hypothetical protein
rbh
hypothetical protein
rbh
Conserved protein, DUF179 n=73 Tax=Propionibacterium RepID=Q6A827_PROAC (db=UNIREF evalue=2.0e-85 bit_score=319.0 identity=90.1 coverage=76.0956175298805)
seg (db=Seg db_id=seg from=89 to=105)
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CARPRO_11_229
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(258241..258906)
|
hypothetical protein
rbh
seg (db=Seg db_id=seg from=210 to=221)
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VAJ9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS65943.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
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CARPRO_11_230
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
259058..259549
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protein-tyrosine phosphatase, low molecular weight
rbh
no description (db=HMMSmart db_id=SM00226 from=24 to=149 evalue=6.8e-37 interpro_id=IPR023485 interpro_description=Phosphotyrosine protein phosphatase I superfamily)
ARSENATE REDUCTASE (db=HMMPanther db_id=PTHR11717:SF3 from=30 to=156 evalue=1.8e-35)
LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (db=HMMPanther db_id=PTHR11717 from=30 to=156 evalue=1.8e-35 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein dephosphorylation (GO:0006470))
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CARPRO_11_231
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(259766..259981)
|
XRE family transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=65 evalue=1.3e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=65 evalue=1.5e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=7 to=59 evalue=2.7e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
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CARPRO_11_232
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(259981..260433)
|
seg (db=Seg db_id=seg from=14 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
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CARPRO_11_233
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
261015..261437
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261015..261437 + ( gc_cont=0.695)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPH06359.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HG
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CARPRO_11_234
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(261482..262042)
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antirestriction ArdA family protein
Antirestriction ArdA family protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LED8_GORB4 (db=UNIREF evalue=2.0e-31 bit_score=138.0 identity=46.59 coverage=91.4438502673797)
seg (db=Seg db_id=seg from=2 to=9)
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CARPRO_11_235
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
262230..263873
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recombinase family protein
rbh
recombinase family protein
rbh
Recombinase family protein n=1 Tax=Bifidobacterium bifidum PRL2010 RepID=E4NZD1_BIFBP (db=UNIREF evalue=7.0e-114 bit_score=415.0 identity=46.91 coverage=84.6715328467153)
seg (db=Seg db_id=seg from=392 to=405)
|
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CARPRO_11_236
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(264238..264861)
|
hypothetical protein
rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=155)
seg (db=Seg db_id=seg from=132 to=146)
|
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CARPRO_11_237
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(264947..265480)
|
hypothetical protein
rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
seg (db=Seg db_id=seg from=131 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=147)
|
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CARPRO_11_238
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(265477..266979)
|
argininosuccinate lyase
rbh
argininosuccinate lyase
rbh
Argininosuccinate lyase n=73 Tax=Propionibacterium RepID=ARLY_PROAC (db=UNIREF evalue=0.0 bit_score=644.0 identity=88.68 coverage=93.2135728542914)
seg (db=Seg db_id=seg from=190 to=209)
|
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CARPRO_11_239
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(267029..268228)
|
acetylornithine aminotransferase
acetylornithine aminotransferase
Aminotransferase, acetylornithine/succinylornithine family n=4 Tax=Propionibacterium RepID=F3NYH6_9ACTO (db=UNIREF evalue=0.0 bit_score=653.0 identity=82.71 coverage=99.25)
seg (db=Seg db_id=seg from=90 to=100)
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CARPRO_11_240
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(268221..269171)
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acetylglutamate kinase
rbh
acetylglutamate kinase
rbh
Acetylglutamate kinase n=73 Tax=Propionibacterium RepID=ARGB_PROAC (db=UNIREF evalue=1.0e-153 bit_score=546.0 identity=93.44 coverage=95.8990536277603)
seg (db=Seg db_id=seg from=206 to=219)
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