ggKbase home page

CARPRO_1_180

Organism: Propionibacterium sp.

near complete RP 53 / 55 MC: 11 BSCG 50 / 51 ASCG 0 / 38
Location: comp(194758..195249)

Top 3 Functional Annotations

Value Algorithm Source
putative MarR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 330
  • Evalue 2.50e-88
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=150 evalue=8.5e-27) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.50e-27
no description (db=HMMSmart db_id=SM00347 from=34 to=137 evalue=1.8e-12 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGACAGAGGATCGCACCGTTTGGCTGGATGACCACCAACAGCGGGTTTGGCGCCTGTGGTTGGAGGTGACGACCGCTCTGCCAGCCGTGCTCAATCGTCAACTGTCGCGCGACTCACAGCTGTCCGTGCAGGACTTTGAGGTCCTCGTCCGGCTGTCGGAGACCGACGACGAGGAGATGAGAGTCGTCGCACTGTCTGAGCACATGGGATGGGAACGGTCGAGGCTGTCCCATCACCTCACTCGTATGGAGAAGCGCGGTCTCATCGAGCGTCGCATCTGCTGCTCCGACGGCCGAGGAGCCATCATCCACCTCACCGATCAGGGGAGGACAGCGCTGCAGCAGGCCGCTCCAGGTCATGCGGCCTTGGTGCGTCGGGTTGTCTTCGGTGGTTTGGATCATGGTCATCTCAACGACCTGGAGACCATTCTCAGCCGCATCTGCGACGGCCTCATCGAGGAGGAGAGGAACCAGCTGGCCGACCCCGAATGA
PROTEIN sequence
Length: 164
VTEDRTVWLDDHQQRVWRLWLEVTTALPAVLNRQLSRDSQLSVQDFEVLVRLSETDDEEMRVVALSEHMGWERSRLSHHLTRMEKRGLIERRICCSDGRGAIIHLTDQGRTALQQAAPGHAALVRRVVFGGLDHGHLNDLETILSRICDGLIEEERNQLADPE*