ggKbase home page

13_1_40cm_3_scaffold_571_8

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(5114..5932)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 7.00e-74
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 271.0
  • Bit_score: 345
  • Evalue 6.20e-92
exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 2.00e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 819
GTGTCAGCAACCCCCCAACTTCCACCAGTAGCCAAGCTAGAACAGAAGACCGTAGTGGATATGGTTACGAAGGGCAAACGGATTGACGAGCGAGGCCTAGAAAGCTACAGACCAATCCAGATCCAGGTAGGGCTTATCGAAAAGGCAAACGGTTCTGCCCAGGTCTACCTCGGCAAATCAAAAGTTCTTTGCGGCATCAAGATCGAGACCGGCGAACCATTCCCAGACACCCCCGACGAAGGGGTCCTGACTGTGAATGCGGAACTGGTCCCGATTGCATCGCCATCCTTCGAGATGGGTCCACCGAGCGAAGCTGCCATTGAACTCTCTAGAGTCGTTGACAGGGGAATAAGAGAGTCCAAGGCAGTCGACCTAAAATCCCTCGTCCTGCAGAAAGGAAAGAAGGTCCAAGTCGTCTACGTGGACGTTTACGTCCTCGACCACGATGGCAATCTGATCGACGCAGCATCCATGGCCGCATTAGCGGCACTCGCCAACTCGAAGGTCGCTAAGATGGAACTTAAGGGCGATGAGGTGATCATGAAGGGCGGGCATCATCAACTGCCCCTCAACAATCACCCGGTCGCGGTCACGTTCGCCAAGATCGACAAGACGATCGTTGTGGATCCGTCCCTTGAGGAGGAACAAGTGATGAGCGCGAGGCTGACCGTAACAATAGACAAGAACGGTCACCTGTGTGCAATGCAGAAGGGCGGACTCTACGGCTTCACACCAGAAGAACTGAAAAAGGTCGTTCACTTGGCGGTTGAAAAGGCGGCGGAGAACCGGGCCAAGATTATGGCCGCGGCGAAGGGCTAA
PROTEIN sequence
Length: 273
VSATPQLPPVAKLEQKTVVDMVTKGKRIDERGLESYRPIQIQVGLIEKANGSAQVYLGKSKVLCGIKIETGEPFPDTPDEGVLTVNAELVPIASPSFEMGPPSEAAIELSRVVDRGIRESKAVDLKSLVLQKGKKVQVVYVDVYVLDHDGNLIDAASMAALAALANSKVAKMELKGDEVIMKGGHHQLPLNNHPVAVTFAKIDKTIVVDPSLEEEQVMSARLTVTIDKNGHLCAMQKGGLYGFTPEELKKVVHLAVEKAAENRAKIMAAAKG*