ggKbase home page

13_1_40cm_2_scaffold_73878_4

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(2000..2569)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK08_ANASK similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 197.0
  • Bit_score: 119
  • Evalue 2.70e-24
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 120
  • Evalue 4.50e-25
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 120
  • Evalue 2.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlorobium limicola → Chlorobium → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 570
TTGGACAGCAGATCTGAATTCCAGGACTTGGTCCATAAGCACCTCAATTCCCTGTACAACTATGCGCTCGTGCTCGCACGGCAGGATGCCGAGGACCTCCTTCAGGAGAGCCTCGTCCGCGCCTGGGAGGCCTTTCACGCGTTCGACCGGTCGCAGAGCTTCAAGCCATGGGTCTTCACGATCATGAGGAACGCCCAGATCGACCGGCAGCGGCGACGGCGGGCGCACCCCGCGGACGCGCCGCTCGGAGATGAGAAGGAGGCCGAGCCGGTGGTGGAAAGTCCGCTCTGCTCCATTCCGCTCGCCCCCGAGGACATCCTGCTTCGTCGCGAGGCGGTCGAGCAGGTGCGGGAGGCGATCCGCCACCTGCCGCCGCTCCTCAGAGAGATCGTCGAGCTCCGCGACATCGAGGGTCTCTCCTACCACGAGATCGCGACGATCCTCAGCCGCCCCGTGGGAACCGTGATGTCGCGACTCTATCGGGGCAGGAACCTGCTTCGCACCTATCTCGTCGAGCCGCCGCAGCGGCCTGACGGGAAGGAGATCGGCGTGCGAAATGATGGACTGTAG
PROTEIN sequence
Length: 190
LDSRSEFQDLVHKHLNSLYNYALVLARQDAEDLLQESLVRAWEAFHAFDRSQSFKPWVFTIMRNAQIDRQRRRRAHPADAPLGDEKEAEPVVESPLCSIPLAPEDILLRREAVEQVREAIRHLPPLLREIVELRDIEGLSYHEIATILSRPVGTVMSRLYRGRNLLRTYLVEPPQRPDGKEIGVRNDGL*