Alias: ACD20_28221.28996.14
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD20_19_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(138..2216)
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hypothetical protein
KAP family P-loop domain-containing protein n=1 Tax=Fusobacterium sp. 3_1_27 RepID=D6LBU6_9FUSO (db=UNIREF evalue=1.0e-54 bit_score=218.0 identity=39.01 coverage=51.0822510822511)
seg (db=Seg db_id=seg from=127 to=140)
seg (db=Seg db_id=seg from=170 to=178)
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ACD20_19_2
uncultured bacterium, Bacteria
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Not on your lists |
2360..4039
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hypothetical protein VspiD_11040 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B9E (db=UNIREF evalue=2.0e-84 bit_score=317.0 identity=39.18 coverage=79.2857142857143)
hypothetical protein (db=KEGG evalue=6.0e-12 bit_score=76.3 identity=30.05 coverage=30.7142857142857)
seg (db=Seg db_id=seg from=539 to=556)
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ACD20_19_3
uncultured bacterium, Bacteria
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Not on your lists |
4191..4427
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4191..4427 + (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03608.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_19_4
uncultured bacterium, Bacteria
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Not on your lists |
4616..5629
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Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFD2_CARHZ (db=UNIREF evalue=4.0e-119 bit_score=431.0 identity=66.07 coverage=97.6331360946746)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
GAPDH (db=PatternScan db_id=PS00071 from=153 to=160 evalue=0.0 interpro_id=IPR020830 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase, active site)
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ACD20_19_5
uncultured bacterium, Bacteria
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Not on your lists |
5744..6529
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tpiA; triosephosphate isomerase (EC:5.3.1.1)
TIM_1 (db=PatternScan db_id=PS00171 from=170 to=180 evalue=0.0 interpro_id=IPR020861 interpro_description=Triosephosphate isomerase, active site)
TRIOSEPHOSPHATE ISOMERASE (db=HMMPanther db_id=PTHR21139 from=1 to=256 evalue=2.1e-100 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
Triosephosphate isomerase (TIM) (db=superfamily db_id=SSF51351 from=1 to=259 evalue=7.1e-89 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
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ACD20_19_6
uncultured bacterium, Bacteria
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Not on your lists |
6707..7372
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zinc carboxypeptidase
Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=3 to=200 evalue=2.5e-34)
Peptidase_M14 (db=HMMPfam db_id=PF00246 from=4 to=151 evalue=8.7e-27 interpro_id=IPR000834 interpro_description=Peptidase M14, carboxypeptidase A GO=Molecular Function: metallocarboxypeptidase activity (GO:0004181), Biological Process: proteolysis (GO:0006508), Molecular Function: zinc ion binding (GO:0008270))
no description (db=Gene3D db_id=G3DSA:3.40.630.10 from=11 to=219 evalue=3.2e-24)
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ACD20_19_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(7405..8667)
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carboxyl--terminal protease
C-terminal processing peptidase subfamily n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJR8_9SYNE (db=UNIREF evalue=1.0e-77 bit_score=293.0 identity=42.2 coverage=87.6484560570071)
seg (db=Seg db_id=seg from=229 to=240)
seg (db=Seg db_id=seg from=10 to=21)
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ACD20_19_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(8681..9535)
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ACD20_19_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(9549..10682)
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Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q002_9BACT (db=UNIREF evalue=2.0e-107 bit_score=393.0 identity=52.76 coverage=93.3862433862434)
radical SAM domain protein
radical SAM domain protein
mena_SCO4494: putative menaquinone biosy (db=HMMTigr db_id=TIGR03700 from=18 to=374 evalue=1.6e-165 interpro_id=IPR022432 interpro_description=Menaquinone biosynthesis, SCO4494, predicted GO=Biological Process: menaquinone biosynthetic process (GO:0009234))
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cytoplasmic
kelly wrighton
(11/15/12)
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ACD20_19_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(10787..11509)
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two-component response regulator
seg (db=Seg db_id=seg from=13 to=24)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=139 evalue=8.6e-39 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=2 to=115 evalue=2.5e-38 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD20_19_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(11525..12697)
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peptidase S1 and S6, chymotrypsin/Hap
peptidase S1 and S6, chymotrypsin/Hap
DegP2 peptidase. Serine peptidase. MEROPS family S01B n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKZ0_SYNFM (db=UNIREF evalue=3.0e-91 bit_score=339.0 identity=51.06 coverage=84.1432225063939)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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ACD20_19_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(12995..13141)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Uncharacterized protein {ECO:0000313|EMBL:EKE03617.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_19_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(13369..14469)
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Aminopeptidase protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CVX7_HALOH (db=UNIREF evalue=9.0e-102 bit_score=374.0 identity=47.22 coverage=97.8201634877384)
aminopeptidase protein (EC:3.4.11.-)
aminopeptidase protein (EC:3.4.11.-)
Peptidase_M29 (db=HMMPfam db_id=PF02073 from=2 to=364 evalue=3.1e-110 interpro_id=IPR000787 interpro_description=Peptidase M29, aminopeptidase II GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508))
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ACD20_19_14
uncultured bacterium, Bacteria
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Not on your lists |
14665..15813
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argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=28 to=376 evalue=9.2e-54 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
AMINOTRANSFERASE CLASS III (db=HMMPanther db_id=PTHR11986 from=23 to=378 evalue=2.4e-32 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACETYLORNITHINE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11986:SF19 from=23 to=378 evalue=2.4e-32 interpro_id=IPR004636 interpro_description=Acetylornithine/succinylornithine aminotransferase GO=Biological Process: arginine metabolic process (GO:0006525), Molecular Function: transaminase activity (GO:0008483))
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ACD20_19_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(15819..16175)
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seg (db=Seg db_id=seg from=9 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
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ACD20_19_16
uncultured bacterium, Bacteria
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Not on your lists |
16357..16659
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hypothetical protein
TIGR00106: uncharacterized protein, MTH1187 (db=HMMTigr db_id=TIGR00106 from=2 to=100 evalue=1.7e-31 interpro_id=IPR002767 interpro_description=Protein of unknown function DUF77)
DUF77 (db=HMMPfam db_id=PF01910 from=4 to=97 evalue=1.0e-29 interpro_id=IPR002767 interpro_description=Protein of unknown function DUF77)
no description (db=Gene3D db_id=G3DSA:3.30.70.930 from=1 to=100 evalue=7.6e-29 interpro_id=IPR002767 interpro_description=Protein of unknown function DUF77)
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ACD20_19_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(16661..17461)
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hypothetical protein
TIGR02757: conserved hypothetical protein T (db=HMMTigr db_id=TIGR02757 from=22 to=257 evalue=1.4e-75 interpro_id=IPR014127 interpro_description=Conserved hypothetical protein CHP02757)
DUF2400 (db=HMMPfam db_id=PF09674 from=26 to=256 evalue=3.2e-75 interpro_id=IPR014127 interpro_description=Conserved hypothetical protein CHP02757)
hypothetical protein alias=ACD20_C00019G00017,ACD20_28221.28996.14G0017,ACD20_28221.28996.14_17 id=18285 tax=ACD20 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
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ACD20_19_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(17454..18023)
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Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9K7_9FIRM (db=UNIREF evalue=3.0e-36 bit_score=154.0 identity=55.71 coverage=72.6315789473684)
tRNA specific adenosine deaminase
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=91 to=128 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
CYTOSINE DEAMINASE (db=HMMPanther db_id=PTHR11079 from=43 to=187 evalue=1.7e-50)
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ACD20_19_19
uncultured bacterium, Bacteria
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Not on your lists |
19021..20103
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PKD repeat protein
NHL repeat (db=superfamily db_id=SSF101898 from=6 to=294 evalue=7.0e-11)
no description (db=Gene3D db_id=G3DSA:2.120.10.30 from=35 to=191 evalue=3.2e-05 interpro_id=IPR011042 interpro_description=Six-bladed beta-propeller, TolB-like)
cellulose-binding alias=ACD20_C00019G00019,ACD20_28221.28996.14G0019,ACD20_28221.28996.14_19 id=18281 tax=ACD20 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
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ACD20_19_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(20119..21819)
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integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
seg (db=Seg db_id=seg from=249 to=265)
seg (db=Seg db_id=seg from=518 to=529)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
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ACD20_19_21
uncultured bacterium, Bacteria
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Not on your lists |
comp(21853..22563)
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OmpR family two-component response regulator
seg (db=Seg db_id=seg from=112 to=122)
no description (db=HMMSmart db_id=SM00448 from=3 to=116 evalue=1.5e-41 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=2 to=140 evalue=3.1e-40 interpro_id=IPR011006 interpro_description=CheY-like)
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ACD20_19_22
uncultured bacterium, Bacteria
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Not on your lists |
22970..24148
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hypothetical protein
seg (db=Seg db_id=seg from=62 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
coiled-coil (db=Coil db_id=coil from=49 to=84 evalue=NA)
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ACD20_19_23
uncultured bacterium, Bacteria
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Not on your lists |
24273..26051
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transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
Uncharacterized protein {ECO:0000313|EMBL:EKE03602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_19_24
uncultured bacterium, Bacteria
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Not on your lists |
26117..27028
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Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=2 Tax=Synechococcus elongatus RepID=ACCD_SYNE7 (db=UNIREF evalue=4.0e-85 bit_score=318.0 identity=53.16 coverage=97.6973684210526)
acetyl-CoA carboxyl transferase
acetyl-CoA carboxyl transferase
accD: acetyl-CoA carboxylase, carboxyl trans (db=HMMTigr db_id=TIGR00515 from=1 to=292 evalue=4.9e-148 interpro_id=IPR000438 interpro_description=Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO=Molecular Function: acetyl-CoA carboxylase activity (GO:0003989), Biological Process: fatty acid biosynthetic process (GO:0006633), Cellular Component: acetyl-CoA carboxylase complex (GO:0009317))
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ACD20_19_25
uncultured bacterium, Bacteria
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Not on your lists |
27036..28001
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Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Synechococcus RepID=Q2JSS7_SYNJA (db=UNIREF evalue=3.0e-97 bit_score=358.0 identity=52.4 coverage=96.8944099378882)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
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ACD20_19_26
uncultured bacterium, Bacteria
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Not on your lists |
28046..28981
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prmA; ribosomal protein L11 methyltransferase PrmA
PrmA (db=HMMPfam db_id=PF06325 from=11 to=310 evalue=2.8e-86 interpro_id=IPR010456 interpro_description=Ribosomal L11 methyltransferase, PrmA GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein amino acid methylation (GO:0006479), Molecular Function: protein methyltransferase activity (GO:0008276))
prmA: ribosomal protein L11 methyltransferas (db=HMMTigr db_id=TIGR00406 from=12 to=305 evalue=3.5e-72 interpro_id=IPR004498 interpro_description=Ribosomal protein L11 methyltransferase GO=Biological Process: protein amino acid methylation (GO:0006479), Molecular Function: protein methyltransferase activity (GO:0008276))
RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (L11 MTASE) (db=HMMPanther db_id=PTHR18895:SF3 from=162 to=311 evalue=7.3e-44)
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