Alias: ACD20_5712.36246.14
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD20_33_1
uncultured bacterium, Bacteria
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Not on your lists |
122..394
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKE02787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_2
uncultured bacterium, Bacteria
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Not on your lists |
492..737
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492..737 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02788.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(837..1652)
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pyrroline-5-carboxylate reductase
P5CR (db=PatternScan db_id=PS00521 from=224 to=246 evalue=0.0 interpro_id=IPR000304 interpro_description=Delta 1-pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation reduction (GO:0055114))
PYRROLINE-5-CARBOXYLATE REDUCTASE (db=HMMPanther db_id=PTHR11645 from=1 to=268 evalue=2.4e-110 interpro_id=IPR000304 interpro_description=Delta 1-pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation reduction (GO:0055114))
Pyrroline-5-carboxylate reductase (db=HMMPIR db_id=PIRSF000193 from=4 to=271 evalue=5.2e-107 interpro_id=IPR000304 interpro_description=Delta 1-pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation reduction (GO:0055114))
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ACD20_33_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1893..2738)
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seg (db=Seg db_id=seg from=111 to=133)
seg (db=Seg db_id=seg from=88 to=97)
Uncharacterized protein {ECO:0000313|EMBL:EKE02790.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_5
uncultured bacterium, Bacteria
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Not on your lists |
3125..3277
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Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=1 to=43 evalue=1.6e-17 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=1 to=44 evalue=3.3e-15 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RL34_COXBU_P45647; (db=BlastProDom db_id=PD003101 from=1 to=42 evalue=3.0e-05 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L34 (db=HAMAP db_id=MF_00391 from=1 to=44 evalue=14.778)
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ACD20_33_6
uncultured bacterium, Bacteria
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Not on your lists |
3280..3666
|
rnpA; ribonuclease P (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5] (db=KEGG evalue=7.0e-09 bit_score=62.8 identity=35.4 coverage=81.3953488372093)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=3 to=116 evalue=1.6e-24 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=118 evalue=2.2e-24 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=125 evalue=1.0e-17 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
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ACD20_33_7
uncultured bacterium, Bacteria
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Not on your lists |
3683..3925
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||
ACD20_33_8
uncultured bacterium, Bacteria
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Not on your lists |
4014..5165
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oxaA; putative inner membrane protein translocase component YidC
seg (db=Seg db_id=seg from=372 to=382)
transmembrane_regions (db=TMHMM db_id=tmhmm from=300 to=322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=269)
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ACD20_33_9
uncultured bacterium, Bacteria
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Not on your lists |
5159..6562
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trmE; tRNA modification GTPase TrmE
trmE; tRNA modification GTPase TrmE
tRNA modification GTPase mnmE n=1 Tax=Clostridium tetani RepID=MNME_CLOTE (db=UNIREF evalue=2.0e-88 bit_score=330.0 identity=41.7 coverage=97.008547008547)
seg (db=Seg db_id=seg from=181 to=192)
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ACD20_33_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(6779..7036)
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6779..7036 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02796.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(7119..7556)
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seg (db=Seg db_id=seg from=34 to=50)
CBS-domain (db=superfamily db_id=SSF54631 from=3 to=62 evalue=1.3e-06)
CBS-domain (db=superfamily db_id=SSF54631 from=66 to=144 evalue=8.4e-06)
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ACD20_33_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(7797..8723)
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rnhC; ribonuclease HIII
ribonuclease HIII n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746832 (db=UNIREF evalue=1.0e-60 bit_score=237.0 identity=40.92 coverage=95.1456310679612)
seg (db=Seg db_id=seg from=79 to=92)
Ribonuclease HIII (db=HMMPIR db_id=PIRSF037748 from=5 to=308 evalue=6.8e-99 interpro_id=IPR004641 interpro_description=Ribonuclease HIII GO=Molecular Function: ribonuclease H activity (GO:0004523), Cellular Component: cytoplasm (GO:0005737), Biological Process: RNA metabolic process (GO:0016070))
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ACD20_33_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(8886..10547)
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polynucleotide adenylyltransferase
seg (db=Seg db_id=seg from=477 to=488)
seg (db=Seg db_id=seg from=156 to=167)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=169 to=532 evalue=1.0e-42)
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ACD20_33_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(10716..11306)
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coiled-coil (db=Coil db_id=coil from=146 to=181 evalue=NA)
seg (db=Seg db_id=seg from=4 to=13)
seg (db=Seg db_id=seg from=129 to=140)
Uncharacterized protein {ECO:0000313|EMBL:EKE02800.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(11678..12922)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
seg (db=Seg db_id=seg from=192 to=205)
seg (db=Seg db_id=seg from=232 to=248)
Uncharacterized protein {ECO:0000313|EMBL:EKE02801.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(13189..13521)
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coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02802.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_17
uncultured bacterium, Bacteria
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Not on your lists |
13650..14603
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6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase n=1 Tax=uncultured bacterium RepID=Q565X6_9BACT (db=UNIREF evalue=7.0e-91 bit_score=337.0 identity=48.52 coverage=99.0566037735849)
2-ketocyclohexane-carboxyl-CoA hydrolase, BadI
seg (db=Seg db_id=seg from=147 to=160)
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ACD20_33_18
uncultured bacterium, Bacteria
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Not on your lists |
14600..15370
|
dch; dienoyl-CoA hydratase
seg (db=Seg db_id=seg from=191 to=202)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=3 to=253 evalue=1.8e-55)
ENOYL-COA HYDRATASE-RELATED (db=HMMPanther db_id=PTHR11941 from=9 to=253 evalue=1.6e-45)
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ACD20_33_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(15380..16147)
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15380..16147 - (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02805.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(16887..17423)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
Uncharacterized protein {ECO:0000313|EMBL:EKE02806.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_21
uncultured bacterium, Bacteria
|
Not on your lists |
18717..19187
|
coiled-coil (db=Coil db_id=coil from=104 to=132 evalue=NA)
seg (db=Seg db_id=seg from=127 to=138)
Uncharacterized protein {ECO:0000313|EMBL:EKE02785.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_22
uncultured bacterium, Bacteria
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Not on your lists |
19662..21605
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hypothetical protein (db=KEGG evalue=1.0e-08 bit_score=65.5 identity=23.75 coverage=31.3271604938272)
seg (db=Seg db_id=seg from=229 to=241)
seg (db=Seg db_id=seg from=135 to=153)
seg (db=Seg db_id=seg from=101 to=115)
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ACD20_33_23
uncultured bacterium, Bacteria
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Not on your lists |
22358..22657
|
response regulator receiver modulated metal dependent phosphohydrolase
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=17 to=93 evalue=7.0e-15)
HD (db=HMMPfam db_id=PF01966 from=10 to=52 evalue=6.0e-08 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
response regulator receiver modulated metal dependent phosphohydrolase; K07814 putative two-component system response regulator alias=ACD20_C00033G00023,ACD20_5712.36246.14G0023,ACD20_5712.36246.14_23 id=18641 tax=ACD20 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
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ACD20_33_24
uncultured bacterium, Bacteria
|
Not on your lists |
23666..23827
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phosphohydrolase
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=2 to=51 evalue=1.2e-07)
metal dependent phosphohydrolase alias=ACD20_C00033G00024,ACD20_5712.36246.14G0024,ACD20_5712.36246.14_24 id=18624 tax=ACD20 species=Exiguobacterium sp. AT1b genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EKE02780.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_25
uncultured bacterium, Bacteria
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Not on your lists |
comp(23854..25119)
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3-isopropylmalate dehydratase, large subunit n=1 Tax=Thermincola sp. JR RepID=D5XAF1_9FIRM (db=UNIREF evalue=5.0e-178 bit_score=627.0 identity=71.6 coverage=98.8151658767773)
3-isopropylmalate dehydratase large subunit
3-isopropylmalate dehydratase large subunit
ACONITASE_1 (db=PatternScan db_id=PS00450 from=294 to=310 evalue=0.0 interpro_id=IPR018136 interpro_description=Aconitase family, 4Fe-4S cluster binding site)
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lysine biosynthesis
Jill Banfield
(11/15/12)
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ACD20_33_26
uncultured bacterium, Bacteria
|
Not on your lists |
25317..26372
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
transmembrane_regions (db=TMHMM db_id=tmhmm from=306 to=328)
seg (db=Seg db_id=seg from=68 to=81)
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ACD20_33_27
uncultured bacterium, Bacteria
|
Not on your lists |
26532..27083
|
26532..27083 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02783.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_28
uncultured bacterium, Bacteria
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Not on your lists |
27942..28871
|
Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZN33_NODSP (db=UNIREF evalue=3.0e-62 bit_score=242.0 identity=38.56 coverage=96.1290322580645)
RimK domain protein ATP-grasp
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=116 to=309 evalue=9.9e-28)
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ACD20_33_29
uncultured bacterium, Bacteria
|
Not on your lists |
comp(29071..29241)
|
seg (db=Seg db_id=seg from=5 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKE02773.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_33_30
uncultured bacterium, Bacteria
|
Not on your lists |
29754..30902
|
proB; glutamate 5-kinase
proB; glutamate 5-kinase
Glutamate 5-kinase n=2 Tax=Brachyspira RepID=C0QZ92_BRAHW (db=UNIREF evalue=2.0e-111 bit_score=405.0 identity=55.26 coverage=98.1723237597911)
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