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ACD20_70

Alias: ACD20_4629.12489.10

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_70_1

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comp(198..2627)
DNA (2430bp) protein (810aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAB2_CLOTS (db=UNIREF evalue=0.0 bit_score=861.0 identity=55.78 coverage=97.6543209876543)
seg (db=Seg db_id=seg from=57 to=70)
cytoplasmic kelly wrighton (11/15/12)
ACD20_70_2

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comp(2643..2825)
DNA (183bp) protein (61aa)
hypothetical protein
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=41 to=52 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=1 to=58 evalue=3.5e-13)
Fer4 (db=HMMPfam db_id=PF00037 from=35 to=57 evalue=7.1e-08 interpro_id=IPR001450 interpro_description=4Fe-4S binding domain GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD20_70_3

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comp(2888..3157)
DNA (270bp) protein (90aa)
AsrR family transcriptional regulator
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=89 evalue=1.8e-25)
no description (db=HMMSmart db_id=SM00418 from=11 to=89 evalue=6.3e-21 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=85 evalue=1.1e-20 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD20_70_4

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comp(3399..3953)
DNA (555bp) protein (185aa)
coiled-coil (db=Coil db_id=coil from=148 to=176 evalue=NA)
seg (db=Seg db_id=seg from=158 to=170)
Uncharacterized protein {ECO:0000313|EMBL:EKE03055.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_5

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4339..4971
DNA (633bp) protein (211aa)
seg (db=Seg db_id=seg from=78 to=93)
Uncharacterized protein {ECO:0000313|EMBL:EKE03056.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_6

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comp(5294..5491)
DNA (198bp) protein (66aa)
5294..5491 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03057.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_7

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5655..5879
DNA (225bp) protein (75aa)
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=6 to=72 evalue=1.8e-07 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg
Uncharacterized protein {ECO:0000313|EMBL:EKE03058.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_8

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6294..6701
DNA (408bp) protein (136aa)
6294..6701 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03059.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_9

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comp(6769..6924)
DNA (156bp) protein (52aa)
seg (db=Seg db_id=seg from=11 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
coiled-coil (db=Coil db_id=coil from=22 to=50 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE03060.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_10

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7102..7341
DNA (240bp) protein (80aa)
seg (db=Seg db_id=seg from=13 to=23)
Uncharacterized protein {ECO:0000313|EMBL:EKE03061.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_11

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7501..8781
DNA (1281bp) protein (427aa)
terminase
Terminase_3 (db=HMMPfam db_id=PF04466 from=25 to=400 evalue=1.3e-25 interpro_id=IPR006701 interpro_description=Phage terminase large subunit GO=Biological Process: DNA packaging (GO:0006323))
phage_term_2: phage terminase, large sub (db=HMMTigr db_id=TIGR01547 from=21 to=424 evalue=1.4e-13 interpro_id=IPR006437 interpro_description=Phage terminase, large subunit, PBSX GO=Biological Process: DNA packaging (GO:0006323))
hypothetical protein alias=ACD20_4629.12489.10G0011,ACD20_4629.12489.10_11,ACD20_C00070G00011 id=19554 tax=ACD20 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_70_12

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8828..9040
DNA (213bp) protein (71aa)
8828..9040 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03063.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_13

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9139..10890
DNA (1752bp) protein (584aa)
Portal protein n=1 Tax=Phormidium phage Pf-WMP3 RepID=A5HL28_9CAUD (db=UNIREF evalue=5.0e-08 bit_score=63.5 identity=22.25 coverage=64.3835616438356)
Portal protein {ECO:0000313|EMBL:EKE03064.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_14

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11296..11553
DNA (258bp) protein (86aa)
11296..11553 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03065.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_70_15

Not on your lists

11768..12499
DNA (732bp) protein (244aa)
coiled-coil (db=Coil db_id=coil from=41 to=69 evalue=NA)
seg (db=Seg db_id=seg from=194 to=210)
Uncharacterized protein {ECO:0000313|EMBL:EKE03066.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 15 items

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