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ACD20_105

Alias: ACD20_13168.18683.14

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_105_1

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88..849
DNA (762bp) protein (254aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=49 to=186 evalue=4.7e-21)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=55 to=131 evalue=2.3e-12 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=52 to=175 evalue=4.7e-12)
ACD20_105_2

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comp(855..1457)
DNA (603bp) protein (201aa)
SNARE associated Golgi protein-like protein
seg (db=Seg db_id=seg from=170 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
ACD20_105_3

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comp(1687..2283)
DNA (597bp) protein (199aa)
Intracellular protease, PfpI family n=1 Tax=bacterium Ellin514 RepID=B9XB58_9BACT (db=UNIREF evalue=2.0e-66 bit_score=254.0 identity=62.3 coverage=91.4572864321608)
yfkM; Putative intracellular protease/amidase
PfpI: intracellular protease, PfpI family (db=HMMTigr db_id=TIGR01382 from=21 to=190 evalue=2.6e-62 interpro_id=IPR006286 interpro_description=Peptidase C56, PfpI GO=Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798))
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=19 to=189 evalue=7.6e-50)
ACD20_105_4

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2742..4520
DNA (1779bp) protein (593aa)
TPR repeat-containing protein n=1 Tax=Azospirillum sp. B510 RepID=D3P8D7_AZOS1 (db=UNIREF evalue=2.0e-72 bit_score=277.0 identity=29.05 coverage=98.1450252951096)
glycosyl transferase group 1
seg (db=Seg db_id=seg from=362 to=376)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=76 to=303 evalue=2.5e-45 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
ACD20_105_5

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comp(4610..5080)
DNA (471bp) protein (157aa)
TPR repeat-containing protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GW25_9DELT (db=UNIREF evalue=8.0e-09 bit_score=62.8 identity=37.33 coverage=47.1337579617834)
TPR-like (db=superfamily db_id=SSF48452 from=6 to=130 evalue=7.1e-18)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=6 to=140 evalue=4.5e-16 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=6 to=153 evalue=1.9e-08)
ACD20_105_6

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comp(5083..6039)
DNA (957bp) protein (319aa)
SAM-dependent methyltransferase
Methyltransferase, FkbM family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LU13_9FIRM (db=UNIREF evalue=1.0e-42 bit_score=177.0 identity=34.09 coverage=94.3573667711599)
fkbM_fam: methyltransferase, FkbM family (db=HMMTigr db_id=TIGR01444 from=134 to=275 evalue=2.2e-27 interpro_id=IPR006342 interpro_description=Methyltransferase FkbM)
Methyltransferase, FkbM family {ECO:0000313|EMBL:EKE04597.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_105_7

Not on your lists

comp(6136..6297)
DNA (162bp) protein (54aa)
6136..6297 - (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_105_8

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comp(6411..7139)
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=78 to=95)
Pili subunits (db=superfamily db_id=SSF54523 from=18 to=73 evalue=3.6e-10)
N_methyl (db=HMMPfam db_id=PF07963 from=17 to=35 evalue=0.00018 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD20_105_9

Not on your lists

comp(7658..10012)
DNA (2355bp) protein (785aa)
DNA internalization-related competence protein ComEC/Rec2
transmembrane_regions (db=TMHMM db_id=tmhmm from=504 to=521)
transmembrane_regions (db=TMHMM db_id=tmhmm from=349 to=368)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=345)
ACD20_105_10

Not on your lists

comp(10516..10848)
DNA (333bp) protein (111aa)
seg (db=Seg db_id=seg from=99 to=108)
Uncharacterized protein {ECO:0000313|EMBL:EKE04601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_105_11

Not on your lists

11020..11757
DNA (738bp) protein (246aa)
hypothetical protein
Uncharacterized conserved protein n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KI17_9FIRM (db=UNIREF evalue=6.0e-28 bit_score=127.0 identity=33.88 coverage=93.4959349593496)
SIMPL (db=HMMPfam db_id=PF04402 from=37 to=244 evalue=2.9e-45 interpro_id=IPR007497 interpro_description=Protein of unknown function DUF541)
Uncharacterized protein {ECO:0000313|EMBL:EKE04602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
periplasmic protein kelly wrighton (11/15/12)
ACD20_105_12

Not on your lists

comp(11862..12713)
DNA (852bp) protein (284aa)
Agmatinase n=1 Tax=Brachyspira murdochii DSM 12563 RepID=D5U7R4_9SPIR (db=UNIREF evalue=1.0e-81 bit_score=306.0 identity=54.89 coverage=92.9577464788732)
agmatinase
agmatinase
agmatinase: agmatinase (db=HMMTigr db_id=TIGR01230 from=3 to=281 evalue=4.4e-107 interpro_id=IPR005925 interpro_description=Putative agmatinase GO=Biological Process: polyamine biosynthetic process (GO:0006596), Molecular Function: agmatinase activity (GO:0008783))
arginine-proline metabolism Jill Banfield (11/15/12)
ACD20_105_13

Not on your lists

comp(12718..13569)
DNA (852bp) protein (284aa)
spermidine synthase
spermidine synthase
Spermidine synthase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K205_DESAC (db=UNIREF evalue=3.0e-80 bit_score=301.0 identity=52.54 coverage=96.1267605633803)
SPERMIDINE_SYNTHASE_1 (db=PatternScan db_id=PS01330 from=81 to=94 evalue=0.0 interpro_id=IPR001045 interpro_description=Spermine synthase GO=Molecular Function: catalytic activity (GO:0003824))
ACD20_105_14

Not on your lists

comp(13606..14049)
DNA (444bp) protein (148aa)
speD; adenosylmethionine decarboxylase (EC:4.1.1.50)
SAM_DCase_Bsu: S-adenosylmethionine dec (db=HMMTigr db_id=TIGR03330 from=16 to=127 evalue=6.7e-69 interpro_id=IPR017716 interpro_description=S-adenosylmethionine decarboxylase proenzyme GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
S-adenosylmethionine decarboxylase (db=superfamily db_id=SSF56276 from=16 to=132 evalue=4.7e-43 interpro_id=IPR016067 interpro_description=S-adenosylmethionine decarboxylase, core GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
no description (db=Gene3D db_id=G3DSA:3.60.90.10 from=15 to=144 evalue=1.0e-41 interpro_id=IPR016067 interpro_description=S-adenosylmethionine decarboxylase, core GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
ACD20_105_15

Not on your lists

14596..16311
DNA (1716bp) protein (572aa)
5'-nucleotidase-like; K01081 5'-nucleotidase [EC:3.1.3.5] (db=KEGG evalue=3.0e-12 bit_score=77.4 identity=26.94 coverage=44.5804195804196)
coiled-coil (db=Coil db_id=coil from=222 to=243 evalue=NA)
seg (db=Seg db_id=seg from=5 to=18)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=18 to=362 evalue=2.6e-19)
ACD20_105_16

Not on your lists

comp(16314..17450)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M579_GEOSF (db=UNIREF evalue=3.0e-126 bit_score=455.0 identity=58.51 coverage=98.9445910290237)
hypothetical protein
hypothetical protein
geo:Geob_1475 hypothetical protein alias=ACD20_13168.18683.14G0016,ACD20_13168.18683.14_16,ACD20_C00105G00016 id=20047 tax=ACD20 species=Geobacter sp. FRC-32 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_105_17

Not on your lists

17774..18475
DNA (702bp) protein (234aa)
Protein tyrosine/serine phosphatase
TYR_PHOSPHATASE_1 (db=PatternScan db_id=PS00383 from=170 to=180 evalue=0.0 interpro_id=IPR016130 interpro_description=Protein-tyrosine phosphatase, active site GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: dephosphorylation (GO:0016311), Molecular Function: phosphatase activity (GO:0016791))
(Phosphotyrosine protein) phosphatases II (db=superfamily db_id=SSF52799 from=75 to=225 evalue=1.9e-22)
no description (db=Gene3D db_id=G3DSA:3.90.190.10 from=81 to=230 evalue=3.4e-12)
ACD20_105_18

Not on your lists

comp(18540..18719)
DNA (180bp) protein (60aa)
seg (db=Seg db_id=seg from=23 to=35)
seg (db=Seg db_id=seg from=38 to=50)
Uncharacterized protein {ECO:0000313|EMBL:EKE04609.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 18 items

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