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ACD20_124

Alias: ACD20_26723.8006.14

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_124_1

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1..639
DNA (639bp) protein (213aa)
DUF1566 (db=HMMPfam db_id=PF07603 from=79 to=120 evalue=4.4e-05 interpro_id=IPR011460 interpro_description=Protein of unknown function DUF1566)
Uncharacterized protein {ECO:0000313|EMBL:EKE03699.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_124_2

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889..1740
DNA (852bp) protein (284aa)
guanylate kinase (EC:2.7.4.8)
coiled-coil (db=Coil db_id=coil from=194 to=215 evalue=NA)
guanyl_kin: guanylate kinase (db=HMMTigr db_id=TIGR03263 from=72 to=253 evalue=5.9e-56 interpro_id=IPR017665 interpro_description=Guanylate kinase, sub-group GO=Molecular Function: guanylate kinase activity (GO:0004385), Biological Process: purine nucleotide metabolic process (GO:0006163))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=67 to=254 evalue=1.8e-52)
ACD20_124_3

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comp(1737..2570)
DNA (834bp) protein (278aa)
TIM alpha/beta barrel protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12UI4_METBU (db=UNIREF evalue=1.0e-83 bit_score=313.0 identity=50.18 coverage=97.841726618705)
endonuclease IV (EC:3.1.21.-)
endonuclease IV (EC:3.1.21.-)
no description (db=HMMSmart db_id=SM00518 from=8 to=273 evalue=4.4e-57 interpro_id=IPR001719 interpro_description=Endodeoxyribonuclease IV GO=Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: deoxyribonuclease IV (phage-T4-induced) activity (GO:0008833))
ACD20_124_4

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2882..4117
DNA (1236bp) protein (412aa)
Surface presentation of antigens (SPOA) (db=superfamily db_id=SSF101801 from=281 to=361 evalue=3.1e-15 interpro_id=IPR001543 interpro_description=Surface presentation of antigen (SpoA))
SpoA (db=HMMPfam db_id=PF01052 from=287 to=357 evalue=4.5e-14 interpro_id=IPR001543 interpro_description=Surface presentation of antigen (SpoA))
Uncharacterized protein {ECO:0000313|EMBL:EKE03702.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_124_5

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4246..4686
DNA (441bp) protein (147aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
FliO (db=HMMPfam db_id=PF04347 from=33 to=98 evalue=2.4e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKE03703.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_124_6

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4699..5340
DNA (642bp) protein (214aa)
fliP; flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z791_9NEIS (db=UNIREF evalue=1.0e-56 bit_score=222.0 identity=50.5 coverage=93.4579439252336)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
ACD20_124_7

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5364..5846
DNA (483bp) protein (161aa)
flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QYD5_9FIRM (db=UNIREF evalue=1.0e-08 bit_score=62.0 identity=39.47 coverage=46.583850931677)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
ACD20_124_8

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5861..6295
DNA (435bp) protein (145aa)
seg (db=Seg db_id=seg from=6 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
CagX (db=HMMPfam db_id=PF03524 from=40 to=101 evalue=0.00024 interpro_id=IPR010258 interpro_description=Conjugal transfer, TrbG/VirB9/CagX)
Uncharacterized protein {ECO:0000313|EMBL:EKE03706.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_124_9

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6297..7076
DNA (780bp) protein (260aa)
flagellar biosynthetic protein FliR
seg (db=Seg db_id=seg from=132 to=148)
seg (db=Seg db_id=seg from=236 to=248)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD20_124_10

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comp(7295..7696)
DNA (402bp) protein (134aa)
7295..7696 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03708.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_124_11

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7796..8008
DNA (213bp) protein (71aa)
7796..8008 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE03709.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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