Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
NusA antitermination factor | rbh |
KEGG
DB: KEGG |
54.0 | 367.0 | 394 | 2.40e-107 | dmt:DESME_11285 |
NusA antitermination factor | similarity |
KEGG
DB: KEGG |
54.0 | 367.0 | 394 | 2.40e-107 | dmt:DESME_11285 |
Transcription termination factor NusA n=1 Tax=Thermincola sp. JR RepID=D5XF10_9FIRM (db=UNIREF evalue=4.0e-106 bit_score=388.0 identity=56.03 coverage=91.2) | similarity |
UNIREF
DB: UNIREF |
56.03 | 91.2 | 388 | 4.00e-106 | dmt:DESME_11285 |
seg (db=Seg db_id=seg from=354 to=374) | iprscan |
interpro
DB: Seg |
null | null | null | null | dmt:DESME_11285 |
NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=7 to=350 evalue=1.1e-172 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: transcription regulator activity (GO:0030528)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.10e-172 | dmt:DESME_11285 |
TRANSCRIPTION TERMINATION FACTOR NUSA (db=HMMPanther db_id=PTHR22648 from=1 to=374 evalue=1.1e-120) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.10e-120 | dmt:DESME_11285 |
NusA_N (db=HMMPfam db_id=PF08529 from=8 to=129 evalue=7.5e-40 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.50e-40 | dmt:DESME_11285 |
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=4 to=139 evalue=2.9e-36 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.90e-36 | dmt:DESME_11285 |
Transcription factor NusA, N-terminal domain (db=superfamily db_id=SSF69705 from=4 to=131 evalue=7.7e-35 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.70e-35 | dmt:DESME_11285 |
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=204 to=281 evalue=3.4e-32 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.40e-32 | dmt:DESME_11285 |
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=218 to=296 evalue=1.1e-31 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.10e-31 | dmt:DESME_11285 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=136 to=203 evalue=9.0e-20 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.00e-20 | dmt:DESME_11285 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=140 to=202 evalue=1.7e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.70e-19 | dmt:DESME_11285 |
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=283 to=351 evalue=2.4e-19 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.40e-19 | dmt:DESME_11285 |
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=299 to=351 evalue=1.6e-13 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.60e-13 | dmt:DESME_11285 |
no description (db=HMMSmart db_id=SM00316 from=138 to=204 evalue=3.8e-10) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.80e-10 | dmt:DESME_11285 |
S1 (db=HMMPfam db_id=PF00575 from=137 to=195 evalue=4.2e-09 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.20e-09 | dmt:DESME_11285 |
no description (db=HMMSmart db_id=SM00322 from=234 to=307 evalue=4.2e-05 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.20e-05 | dmt:DESME_11285 |
no description (db=HMMSmart db_id=SM00322 from=308 to=374 evalue=0.11 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.10e-01 | dmt:DESME_11285 |
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=309 to=374 evalue=10.357 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.04e+01 | dmt:DESME_11285 |
S1 (db=ProfileScan db_id=PS50126 from=140 to=204 evalue=10.594 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.06e+01 | dmt:DESME_11285 |
tjr:TherJR_1374 transcription termination factor NusA; K02600 N utilization substance protein A alias=ACD20_C00016G00006,ACD20_16753.48943.14G0006,ACD20_16753.48943.14_6 id=18236 tax=ACD20 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 715 | 7.00e-204 | dmt:DESME_11285 |
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
99.7 | 374.0 | 714 | 6.90e-203 | K2DEQ8_9BACT |