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rifcsphigho2_01_scaffold_6683_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_200

partial RP 35 / 55 MC: 5 BSCG 5 / 51 ASCG 28 / 38
Location: comp(9679..9990)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit m (EC:2.7.7.6); K03057 transcription elongation factor Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 103.0
  • Bit_score: 144
  • Evalue 1.00e-31
rpoM1; RpoM1 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 106.0
  • Bit_score: 108
  • Evalue 1.60e-21
DNA-directed RNA polymerase subunit n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NE53_METST similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 106.0
  • Bit_score: 108
  • Evalue 5.90e-21

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 312
ATGATGGAATTTTGTCAAAAATGTGGGGGGATAATTGTAGTCAAAGAACAAAAAGCAGTCTGCGCTGCCTGCGGAACAAAGTATGCTAAAAAACCAAAATTAGAAGCATCTGAAAAGATTGGGAAGAGAGATATGGTAGCAGTGATAGATGAGGATATGGATAATACGTATCCTATCGTAGATATGACCTGTCCAAAATGCAAAAATAAAAAATCGTATTTTTGGACGACTCAAACTCGCGCTTCGGACGAATCAGAGACCAAATTTTATAAATGCACTAAGTGCAAGCATACCTGGCGAAAGTACAGATAG
PROTEIN sequence
Length: 104
MMEFCQKCGGIIVVKEQKAVCAACGTKYAKKPKLEASEKIGKRDMVAVIDEDMDNTYPIVDMTCPKCKNKKSYFWTTQTRASDESETKFYKCTKCKHTWRKYR*