ggKbase home page

rifcsphigho2_01_scaffold_16773

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16773_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..397
DNA (396bp) protein (132aa)
Peroxiredoxin {ECO:0000313|EMBL:EMS73697.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EMS73697.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;"
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI0003638099
peroxiredoxin
rifcsphigho2_01_scaffold_16773_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(407..1084)
DNA (678bp) protein (226aa)
hypothetical protein Tax=AR11
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_16773_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1182..2885
DNA (1704bp) protein (568aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=8 Tax=Geobacillus RepID=C9S028_GEOSY
D-3-phosphoglycerate dehydrogenase Tax=AR11
rifcsphigho2_01_scaffold_16773_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3040..3516
DNA (477bp) protein (159aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI33_RHOMR
Small heat shock protein Tax=AR11
heat shock protein Hsp20
rifcsphigho2_01_scaffold_16773_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3608..3877
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QXD3_METFO
hypothetical protein
Uncharacterized protein Tax=AR11
rifcsphigho2_01_scaffold_16773_6

Not on your lists

3868..4761
DNA (894bp) protein (298aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965};
carbohydrate kinase
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_16773_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4761..5351
DNA (591bp) protein (197aa)
NUDIX hydrolase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QT31_SPILD
NUDIX hydrolase Tax=AR11
NUDIX hydrolase
rifcsphigho2_01_scaffold_16773_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5711..7585
DNA (1875bp) protein (625aa)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5048614 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATP-dependent protease, archaeal Lon-like protein Tax=AR11
ATP-dependent protease Lon
rifcsphigho2_01_scaffold_16773_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7678..8301
DNA (624bp) protein (208aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_16773_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

8391..8645
DNA (255bp) protein (85aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_16773_11
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


comp(8642..9619)
DNA (978bp) protein (326aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Woesearch_03
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
gcp; DNA-binding/iron metalloprotein/AP endonuclease
rifcsphigho2_01_scaffold_16773_12
unknown

Not on your lists

comp(9679..10371)
DNA (693bp) protein (231aa)

This feature has no annotations

Displaying 12 items

View Taxonomy