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rifcsphigho2_01_scaffold_1971

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_1971_1
unknown

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241..756
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_2
Plasmodium reichenowi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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749..1201
-----------------
DNA (453bp)
protein (151aa)
sirohydrochlorin cobaltochelatase n=1 Tax=Brevibacillus laterosporus RepID=UPI00037F7810
Osmiophilic body protein {ECO:0000313|EMBL:CDO65773.1}; TaxID=5854 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="P
periplasmic solute-binding protein
rifcsphigho2_01_scaffold_1971_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1204..2307
-----------------
DNA (1104bp)
protein (368aa)
Cell division protein FtsH {ECO:0000313|EMBL:EGK08698.1}; EC=3.4.24.- {ECO:0000313|EMBL:EGK08698.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospor
Microtubule-severing ATPase (EC:3.6.4.3)
Cell division protein FtsH n=1 Tax=Desmospora sp. 8437 RepID=F5SJJ6_9BACL
rifcsphigho2_01_scaffold_1971_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(2374..3114)
-----------------
DNA (741bp)
protein (247aa)
ubiquinone/menaquinone biosynthesis methyltransferase UBIE (EC:2.1.1.-) Tax=RBG_16_Micrarchaeota_36_9_curated
Methyltransferase, UbiE/COQ5 family n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWZ9_9BACT
methylase
rifcsphigho2_01_scaffold_1971_5
unknown

Not on your lists

3241..3864
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_6
unknown

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3861..4307
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_7
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(4356..4904)
-----------------
DNA (549bp)
protein (183aa)
putative 3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase id=3536332 bin=GWA1_Deltaproteobacteria_52_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
rifcsphigho2_01_scaffold_1971_8

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5072..6802
-----------------
DNA (1731bp)
protein (577aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Aquifex aeolicus (strain VF5) RepID=GLMS_AQUAE
glmS; glucosamine--fructose-6-phosphate aminotransferase
rifcsphigho2_01_scaffold_1971_9
unknown

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comp(6868..7380)
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_10
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(7406..7687)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsphigho2_01_scaffold_1971_11
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(7684..9054)
-----------------
DNA (1371bp)
protein (457aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5240589 bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_1971_12

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9151..10410
-----------------
DNA (1260bp)
protein (420aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=5048104 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
adenosylhomocysteinase (EC:3.3.1.1)
rifcsphigho2_01_scaffold_1971_13
AR4, Woesearchaeaota, DPANN, Archaea

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10573..11439
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E023F
Tax=AR4
rifcsphigho2_01_scaffold_1971_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11429..11746
-----------------
DNA (318bp)
protein (106aa)
id=5041876 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_1971_15
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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11847..12830
-----------------
DNA (984bp)
protein (328aa)
carbohydrate kinase Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
PfkB family carbohydrate kinase id=5046907 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PfkB family carbohydrate kinase
rifcsphigho2_01_scaffold_1971_16
unknown

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12886..14271
-----------------
DNA (1386bp)
protein (462aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_17
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14278..15213)
-----------------
DNA (936bp)
protein (312aa)
TIM-barrel protein, nifR3 family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2ZAJ3_9FIRM
putative dihydrouridine synthase Tax=RBG_16_Deltaproteobacteria_71_12_curated
tRNA-dihydrouridine synthase
rifcsphigho2_01_scaffold_1971_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

15427..16713
-----------------
DNA (1287bp)
protein (429aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
methylthioadenosine phosphorylase
rifcsphigho2_01_scaffold_1971_19
unknown

Not on your lists

16950..17423
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1971_20
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(17442..18539)
-----------------
DNA (1098bp)
protein (366aa)
similar to histidine triad (HIT) protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
protein hit
rifcsphigho2_01_scaffold_1971_21
R_OP3X_45_10, OP3X, Bacteria

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18671..19684
-----------------
DNA (1014bp)
protein (338aa)
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
rifcsphigho2_01_scaffold_1971_22

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20030..20353
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368F066
Uncharacterized protein {ECO:0000313|EMBL:KKN29432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_1971_23

Not on your lists

20407..21228
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase {ECO:0000313|EMBL:KHO51789.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_1971_24
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(21233..22156)
-----------------
DNA (924bp)
protein (308aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Transcription initiation factor IIB id=5799701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription initiation factor IIB
rifcsphigho2_01_scaffold_1971_25
GWA2_OD1_42_9_A833, Azambacteria, Parcubacteria, Bacteria

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22471..22752
-----------------
DNA (282bp)
protein (94aa)
hypothetical protein Tax=GWA2_OD1_42_9_A833
rifcsphigho2_01_scaffold_1971_26

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23006..23578
-----------------
DNA (573bp)
protein (191aa)
id=5085535 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Uncharacterized protein {ECO:0000313|EMBL:KKS95204.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
rifcsphigho2_01_scaffold_1971_27
CG_Elusi_03, Elusimicrobia, Bacteria

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23632..23964
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein Tax=CG_Elusi_03
DNA-damage-inducible protein D id=4098682 bin=GWF2_OP3_43_52 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
rifcsphigho2_01_scaffold_1971_28

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24401..25768
-----------------
DNA (1368bp)
protein (456aa)
id=5085534 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Uncharacterized protein {ECO:0000313|EMBL:KKS95203.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
rifcsphigho2_01_scaffold_1971_29
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25830..31391
-----------------
DNA (5562bp)
protein (1854aa)
VCBS repeat-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSR4_SOLCM
VCBS repeat-containing protein
VCBS repeat-containing protein {ECO:0000313|EMBL:AFD05208.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;"
rifcsphigho2_01_scaffold_1971_30
unknown

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31513..31653
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

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