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rifcsphigho2_01_scaffold_51024_9

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_8

partial RP 34 / 55 MC: 6 BSCG 7 / 51 ASCG 29 / 38 MC: 3
Location: comp(3216..4001)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 256.0
  • Bit_score: 289
  • Evalue 2.70e-75
3'-5' exoribonuclease Tax=GWA2_OP11_46_7 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 256.0
  • Bit_score: 298
  • Evalue 8.30e-78
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 254.0
  • Bit_score: 265
  • Evalue 1.20e-68

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Taxonomy

GWA2_OP11_46_7 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 786
ATGGTATCTGAATTAAAATTATACGTTGAGTCTTTGCTTAACAAAGGCAAGAGAACTGACTTAAGAAGATTTGATGAGTATAGGGAGCCGATAACAATAGAATATGGTGTATCATCCAAATCTGCAGAGGGATCTGCAAGAGTTACGCTAGGAGAAACTATTGTAATAGCTGGAGTAAAGCTTGGAGTTGACAAGCCTTATCCTGACAATCCTGATGAAGGCACCATAATAGTAAACTCTGAGTTGTTGCCGTTGAGCTCGCCTGATTTTGAGGCAGGGCCTCCTGATGTCAATGCAATAGAGCTTTCAAGAATAGTTGATCGGGCTATAAGGGAAAGCAAGGCTCTTGACTTCAAGAAGCTGTGCATAAAAAGAGGGGAAAAATGCTGGATAGTGTTCATAGACATTTATTCGATAAACGATGCTGGAAACTTGTTTGATGCAGCAAACCTTGCGGCTTTAGCAGCTTTGAAAGACGCAAGATTTCCCAAATATGACACTGAAACCGGGACTGTCAAGTATGATGAAAGGACTGAGAAACACATTGAGCTTGAAAAAATGCCTATATCCTGCACAATACTGAAAATTGGGAAAAACTTCATATTTGACCCAACGATAGATGAGGAGAATTCAATGGATGCGAGGCTTACGGTTGCCACTGCTGACAATGACACAATATGCGCTATGCAAAAGGGCGGTGAAACCCCATTGTCAATAGACGAGATTAAAACCATGGTTGACATGGCTCTTAATAAGAGGGAGGAATTATTGCAACACTTAAAATGA
PROTEIN sequence
Length: 262
MVSELKLYVESLLNKGKRTDLRRFDEYREPITIEYGVSSKSAEGSARVTLGETIVIAGVKLGVDKPYPDNPDEGTIIVNSELLPLSSPDFEAGPPDVNAIELSRIVDRAIRESKALDFKKLCIKRGEKCWIVFIDIYSINDAGNLFDAANLAALAALKDARFPKYDTETGTVKYDERTEKHIELEKMPISCTILKIGKNFIFDPTIDEENSMDARLTVATADNDTICAMQKGGETPLSIDEIKTMVDMALNKREELLQHLK*