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rifcsphigho2_01_scaffold_51024_11

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_8

partial RP 34 / 55 MC: 6 BSCG 7 / 51 ASCG 29 / 38 MC: 3
Location: comp(4698..5384)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 225.0
  • Bit_score: 270
  • Evalue 2.80e-69
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 226.0
  • Bit_score: 268
  • Evalue 2.10e-69
Probable exosome complex RNA-binding protein 1 id=5800799 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 227.0
  • Bit_score: 268
  • Evalue 5.70e-69

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Taxonomy

archaeon GW2011_AR17 → Archaea

Sequences

DNA sequence
Length: 687
ATGGGATTAATGATAGAAGACAAGCAATTCGTGATTCCTGGGCAAAGGCTTGCAGAAGGCATGGATTATCTGCCTGCTAATGGAACTTACAGGGAAGAAGACAACATATATTCAGCACAGCTCGGCATCGTTAATGTAGTTGGAAGGCTTGTGAAGGTAATAAGCCTAAGTGGAAGGTACATACCTAAAACTGGAGATACTGTAATAGGAAAGATAACAAACATAGGATTCAATGGATGGATGGTTGACATTAACTATGCATATGAATCAGCATTGTCATTGAAAGAAGCAACATCTGATTTCATAGAGAGAGGCGCTGATTTAACGAAATACTTTGATTTTGGAGAGATAATCGTGGCTAATGTAATAAACGTGACAAAATCCAAGGCAATAGACCTGTCAATGAAAGGACCAGGGCTTAGAAAGCTTAAAGGAGGAAAACTTATAGAAGTAACTTCATCAAAGGTCCCTAGAATAATAGGAAAGCAAGGAAGCATGATAACGTTGATAAAGAATGCCACGAACTGCAAGATAATTATTGGGCAAAATGGCTGGGTATGGATTCTTGGGGATGACCTGAATGATGAGATGCTTGCAGCGGCCGCAATACTAAAGATAGAGCAGGAGGCGCACACATCCGGATTAACCGACAAAATAAGCGCTTTCCTGAAGGAAAATTCAAAATGA
PROTEIN sequence
Length: 229
MGLMIEDKQFVIPGQRLAEGMDYLPANGTYREEDNIYSAQLGIVNVVGRLVKVISLSGRYIPKTGDTVIGKITNIGFNGWMVDINYAYESALSLKEATSDFIERGADLTKYFDFGEIIVANVINVTKSKAIDLSMKGPGLRKLKGGKLIEVTSSKVPRIIGKQGSMITLIKNATNCKIIIGQNGWVWILGDDLNDEMLAAAAILKIEQEAHTSGLTDKISAFLKENSK*