ggKbase home page

rifcsphigho2_01_scaffold_5837_20

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Aenigmarchaeota_AR5_44_11

near complete RP 31 / 55 MC: 8 BSCG 19 / 51 MC: 2 ASCG 34 / 38 MC: 1
Location: 14360..14623

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit H {ECO:0000255|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00025};; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Therm similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 1.80e-13
DNA-directed RNA polymerase subunit H n=2 Tax=Pyrococcus furiosus RepID=RPOH_PYRFU similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 1.30e-13
DNA-directed RNA polymerase subunit H similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 3.70e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrococcus furiosus → Pyrococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 264
TTGCCGAAAGCGAAGGAAAAAGACGAGGAGAAGAAGCAGGTAGATATATTCGGATCAGGCCTTGTGCCGAAGCATGAGATAATGTCAGGTGACGAAAAAGCCAGCCTGCTGGAAATATTGAATATTAGCCATAGGCAACTGCCGCGAATTAAGGAAGACGACCCTGTTGTCAAGGTGCTCGGAGCAAAGAAAGGTGATGTGCTGCGCATCACTAGAAGGTCCCCTATCGGCACAGATTCCTATTATTACAGGGTAGTTGTGTAG
PROTEIN sequence
Length: 88
LPKAKEKDEEKKQVDIFGSGLVPKHEIMSGDEKASLLEILNISHRQLPRIKEDDPVVKVLGAKKGDVLRITRRSPIGTDSYYYRVVV*