ggKbase home page

rifcsphigho2_01_scaffold_8581_24

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_29_23

partial RP 25 / 55 MC: 3 BSCG 17 / 51 ASCG 23 / 38 MC: 3
Location: comp(11144..11647)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H1_S40554 {ECO:0000313|EMBL:GAG44618.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 161.0
  • Bit_score: 167
  • Evalue 1.80e-38
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5048744 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 160.0
  • Bit_score: 101
  • Evalue 1.20e-18
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 156.0
  • Bit_score: 83
  • Evalue 5.40e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 504
ATGGATAAATCACAAATAAATTTTGGGGAAAAAGTAAAATTAGATATAAATGACAAAAAGATATTGGAAGTTCTACAAAAAGAGGCTCGCCTTCCTGTCACAAAAATAGCCAAAAAAGTAAAAATGCCTGTGGATAGTATTAAGTACAGAATTCAAAGACTAGAAAAGCTTGGAGTGATAAGATTTTACCATACTGTCCTGAATTTTCCATTGTTAGGATTTCCAATGTATAGTTATACTCTTTTCTCACTTTTTGCTATGAATGAAACAGAGGAAAAGGCATTTATTAGTTATCTAGTTTCGCAACCGAATGTTACATGGGTGTCAAAGACAACAGGAAAATGGGATTTTGTTATTGGAACTTGCACAAAAGATTTCAAAGAGTATGATGAAATAATGAAATTAATCAGGATAAAATTCTCAAAATTCATCAAAGATTTTGAAAATGTTTCTACAATTGAAGAATACAAATATGATGCTATGTATGGGCTGATAAATGGATAA
PROTEIN sequence
Length: 168
MDKSQINFGEKVKLDINDKKILEVLQKEARLPVTKIAKKVKMPVDSIKYRIQRLEKLGVIRFYHTVLNFPLLGFPMYSYTLFSLFAMNETEEKAFISYLVSQPNVTWVSKTTGKWDFVIGTCTKDFKEYDEIMKLIRIKFSKFIKDFENVSTIEEYKYDAMYGLING*