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bjp_ig2158_scaffold_3973_1

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 2..325

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 103.0
  • Bit_score: 157
  • Evalue 1.20e-35
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 108.0
  • Bit_score: 153
  • Evalue 1.30e-34
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 131
  • Evalue 1.40e-28

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 324
TCCAGCCTGGACAGCGAGAGCGAGGCCCTCATTCAGGATGGGCTGCAGGCGCTCCGTGCGGGGCGAACCACCTTCGTGATCGCCCATCGGCTCTCCACCATCATGAGCGCGGACCAGATCCTGGTGCTGGAGGAGGGGGCGATCGTGGAGCGCGGGACCCACGAGGAGTTGCTCGCCCTCGACGGCCGGTACCGCGAACTCTACGATCGCCAGTTCCGGATCGAACGGAACCGGTTCATCAACCCCGGGGAGGATTTCACCCCCGAGCTGCCGAGCCCGGCCTCGACCGGATCGCCCCGCGGGCGAGGCCCCGGCACGGACTGA
PROTEIN sequence
Length: 108
SSLDSESEALIQDGLQALRAGRTTFVIAHRLSTIMSADQILVLEEGAIVERGTHEELLALDGRYRELYDRQFRIERNRFINPGEDFTPELPSPASTGSPRGRGPGTD*