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rifcsplowo2_01_scaffold_23262

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_23262_1
unknown

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3..191
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsplowo2_01_scaffold_23262_2
CG_Pacearch_03, Pacearchaeota, Archaea

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318..986
-----------------
DNA (669bp)
protein (223aa)
Ferredoxin reductase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUD7_9FLAO
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=CG_Pacearch_03
flavodoxin reductase family protein
rifcsplowo2_01_scaffold_23262_3
CG_Pacearch_03, Pacearchaeota, Archaea

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1018..1299
-----------------
DNA (282bp)
protein (94aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_23262_4
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(1394..1870)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BE02E
hypothetical protein Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_23262_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1873..3522)
-----------------
DNA (1650bp)
protein (550aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SecD/SecF/SecDF export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Pacearch_02
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_23262_6
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(3519..4406)
-----------------
DNA (888bp)
protein (296aa)
SecD/SecF/SecDF export membrane protein; K03074 preprotein translocase subunit SecF Tax=CG_Pacearch_03
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_23262_7

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comp(4768..5181)
-----------------
DNA (414bp)
protein (138aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
Nucleotide-binding protein, PIN protein {ECO:0000313|EMBL:KHO54924.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Nucleotide-binding protein, PIN domain-containing protein
rifcsplowo2_01_scaffold_23262_8

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comp(5181..5396)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54925.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein id=5045958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_23262_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6374..7066
-----------------
DNA (693bp)
protein (231aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI000380E5E9
uridylate kinase, putative
rifcsplowo2_01_scaffold_23262_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

7067..7501
-----------------
DNA (435bp)
protein (145aa)
ribonuclease P (EC:3.1.26.5); K03539 ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] Tax=CG_Pacearch_02
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI00037FD0AF
Ribonuclease P protein component 3
rifcsplowo2_01_scaffold_23262_11
CG_Pacearch_06, Pacearchaeota, Archaea

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7524..9047
-----------------
DNA (1524bp)
protein (508aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
rifcsplowo2_01_scaffold_23262_12
CG_Pacearch_02, Pacearchaeota, Archaea

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9049..10683
-----------------
DNA (1635bp)
protein (545aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Pacearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsplowo2_01_scaffold_23262_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10689..11162)
-----------------
DNA (474bp)
protein (158aa)
id=5799860 Tax=CG_Pacearch_06
id=5799860 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_23262_14

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11463..12152
-----------------
DNA (690bp)
protein (230aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46229.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_23262_15
CG_Pacearch_05, Pacearchaeota, Archaea

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12174..12452
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein Tax=CG_Pacearch_05
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_23262_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(12453..12893)
-----------------
DNA (441bp)
protein (147aa)
nucleoside diphosphate kinase (EC:2.7.4.6) Tax=RBG_13_Pacearchaeota_33_26_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase id=4512452 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
rifcsplowo2_01_scaffold_23262_17
unknown

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comp(12949..13185)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_23262_18
unknown

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comp(13499..13711)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsplowo2_01_scaffold_23262_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(13708..14022)
-----------------
DNA (315bp)
protein (105aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
Displaying 19 items

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