ggKbase home page

rifcsplowo2_01_scaffold_12169_3

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_37_9

partial RP 27 / 55 MC: 7 BSCG 15 / 51 MC: 1 ASCG 27 / 38
Location: comp(1807..2667)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase TruB domain protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Pacearchaeota_35_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 288.0
  • Bit_score: 326
  • Evalue 5.30e-86
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 217.0
  • Bit_score: 215
  • Evalue 7.20e-53
pseudouridylate synthase TruB domain protein similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 276.0
  • Bit_score: 207
  • Evalue 7.20e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Pacearchaeota_35_8_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 861
ATGAAAATAGACTTGGATAAAATAAAGAAAGAGAAGCCAATTGAAGACTTAATTAGATTTGGAATAATAAATATAGACAAGCCAAACGGCCCAACTTCATTCAGCGTGTCGGACTATGTAAGGAGATCTCTCTGCATCAATAAGACCTCTCACGCAGGGACACTTGATCCAATTGTTTCAGGAGTTTTACCAATCATGCTTGGGAGAGCATGCCGCTTAAGCGATTACCTCATGCATAGGGATAAAAAATATGTCGGCATAATGAGGCTGCATGAGGATATTCCAGATATCCGATTAGATGAAGTTATCAAAAAGTTTATTGGAAAAATAAAACAATTGCCGCCCGTTAGATCGAGAGTCAAGCGGGCTGAGAGAGTCCGAGAGATAAAAACATTCAAAATCCTAGAGAGAAATGGGAAAGATGTGCTTTTTGAGACAGAAGTGCAAGCTGGAACCTATATCAGAAAGTTATGCGATGACATTGGAAAAGAAACAGGGGGGGCGCACATGCTTGAATTGAGGAGAACAAAAGCAGGGATGTTTGATGAAAAAGAAAGCAAAAATATGTATGATTTTGAAGAAGCTGTCAAAGAATTGAACGCTGGAAATGAAAATAAATTGAGAAGCATGATTATTCCTGCTGAAGTAATCGGGAGCGTCCTGGGAGTTGTAGAATTAAAGCCTGAATATATAAGAAAATATCACACTGGTTCTCCCCTATTCAGGCATTTTCTCAAGAATAAGACAACGCTACCTGAAGGGGAGAATATAGCCTGTTTTGCAGAGGGTAGATTTATAGGCTGCTACAAGATTGTCAATGAAGAAGAAGTTTGGGCTGTGCCTGAATTTATCTTCAATTAA
PROTEIN sequence
Length: 287
MKIDLDKIKKEKPIEDLIRFGIINIDKPNGPTSFSVSDYVRRSLCINKTSHAGTLDPIVSGVLPIMLGRACRLSDYLMHRDKKYVGIMRLHEDIPDIRLDEVIKKFIGKIKQLPPVRSRVKRAERVREIKTFKILERNGKDVLFETEVQAGTYIRKLCDDIGKETGGAHMLELRRTKAGMFDEKESKNMYDFEEAVKELNAGNENKLRSMIIPAEVIGSVLGVVELKPEYIRKYHTGSPLFRHFLKNKTTLPEGENIACFAEGRFIGCYKIVNEEEVWAVPEFIFN*