ggKbase home page

rifcsplowo2_01_scaffold_960_20

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_81

near complete RP 37 / 55 MC: 7 BSCG 7 / 51 ASCG 35 / 38 MC: 2
Location: comp(13132..13827)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 230.0
  • Bit_score: 242
  • Evalue 6.20e-61
30S ribosomal protein S4E; K02987 small subunit ribosomal protein S4e id=5042313 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 230.0
  • Bit_score: 198
  • Evalue 5.60e-48
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 241.0
  • Bit_score: 195
  • Evalue 1.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 696
ATGGCAAAAAACAGTCTAAAAAGGTATAATGCGCCGAAAACATGGAAGATAAAGAGAAAGGGAGTAACTTTTGCCACTAGGCAGAATCCGGGACCGCATTCGAAGGGTATGGGCCTGCCGCTCAATATACTCTTGAGGGATATGCTGCATTATTCAAGCACAACAAGAGAGTCGAAGTACATATTAACTAAGAAGAATGTCATTGTTGACGGCAAAAAGAGAAACAGCCACAAATTCCCTGTTGGGCTTTTTGATGTGATAGATGTAGGGGATGTAAACAAAAGCTATAGGATCCTGCTTGACAAAAGGGGCAATCTTACATTTGCAGAGATAGGCAAAAGCGAGTCGAATATAAAGCCTTGCAAGATAATCAGAAAGACTGTTGTAGGTGGAAAAATCCAGGTGAATTTATACGACGGGAAGAACATACTTGTTGGCAAGGATGGCTATAAAACAGGCGACACTCTGTTTTTAGAGCTGCCGGCTCTCAATGTCAGGAAGCATGTGCCTCTGCAGAAAAATGTCCTGATTTACCTTACAGGCGGAAAGCATATTGGAGAGGTTGGGAAAGTAAAGGACATCGTTGGCAACAGGATTATGTATATAATGGAAAATGGGGATGTCGCTGAGACTTTAAAAAAATACGCTTTTGTTGTCGGTGAGGATAAGCCAGTTATCACCATCAAGAAAGATTAA
PROTEIN sequence
Length: 232
MAKNSLKRYNAPKTWKIKRKGVTFATRQNPGPHSKGMGLPLNILLRDMLHYSSTTRESKYILTKKNVIVDGKKRNSHKFPVGLFDVIDVGDVNKSYRILLDKRGNLTFAEIGKSESNIKPCKIIRKTVVGGKIQVNLYDGKNILVGKDGYKTGDTLFLELPALNVRKHVPLQKNVLIYLTGGKHIGEVGKVKDIVGNRIMYIMENGDVAETLKKYAFVVGEDKPVITIKKD*