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ACD21_28_16

Organism: ACD21

near complete RP 51 / 55 MC: 17 BSCG 48 / 51 MC: 7 ASCG 0 / 38
Location: comp(13088..13585)

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 160
  • Evalue 4.50e-37
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=165 evalue=5.2e-58 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.20e-58
PRC-barrel domain (db=superfamily db_id=SSF50346 from=97 to=165 evalue=2.2e-20 interpro_id=IPR011033 interpro_description=PRC-barrel-like) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-20

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 498
ATGTTCGATCCTGTGATCATCGGTAGTTTTGGCAAGACTTTCGGTGTTCGGGGTTGGATTAAGATCAATTCATTTGCTATTCCCCGGAAAAATATTCTTGATTTTAAGCCCTGGCTAATCCAAAAAAATAATTCTTGGGAAGAGTTTTATTTTACAGATAGTCGCCAGCATGTTGATAGTATCGTTGTAAAATTGCCAAATTGTAACTCGCCTGAAGAGGCGCGCGCTTTTACCAACATTAAAATTGGTGTTTGGCGCAAACAGCTGCCAAAGTTGCAAATTGATGAATATTATTGGACAGATCTTGTTGGTTTGAAAGTGATCAATTCAGATGGGGTTGATCTTGGGGTGGTACAGGCGCTAATGGCGACTGGGGCAAATGACGTGTTAGTTGTAATGGGTGATCGCAAACGTCTTATTCCCTATATTTCAGACGTAATTCTTAAGGTTGATTTGGCAAAAAAAATTATTCGTGTTGATTGGGAACAGGATTTTTAA
PROTEIN sequence
Length: 166
MFDPVIIGSFGKTFGVRGWIKINSFAIPRKNILDFKPWLIQKNNSWEEFYFTDSRQHVDSIVVKLPNCNSPEEARAFTNIKIGVWRKQLPKLQIDEYYWTDLVGLKVINSDGVDLGVVQALMATGANDVLVVMGDRKRLIPYISDVILKVDLAKKIIRVDWEQDF*